RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 DZIP1LQ8IYY4 767 aaKnown RBP33.45■■■□□ 2.95
RTN4R-201ENST00000043402 PMFBP1Q8TBY8 1022 aa33.44■■■□□ 2.94
RTN4R-201ENST00000043402 RGPD8O14715 1765 aaPredicted RBP33.44■■■□□ 2.94
RTN4R-201ENST00000043402 TRIM27P14373 513 aa33.44■■■□□ 2.94
RTN4R-201ENST00000043402 NALCNQ8IZF0 1738 aa33.44■■■□□ 2.94
RTN4R-201ENST00000043402 CEP170BQ9Y4F5 1589 aaPredicted RBP33.43■■■□□ 2.94
RTN4R-201ENST00000043402 DLG5Q8TDM6 1919 aa33.42■■■□□ 2.94
RTN4R-201ENST00000043402 EIF4A2Q14240 407 aaKnown RBP33.41■■■□□ 2.94
RTN4R-201ENST00000043402 FTSJ3Q8IY81 847 aaKnown RBP33.41■■■□□ 2.94
RTN4R-201ENST00000043402 LAS1LQ9Y4W2 734 aaKnown RBP33.41■■■□□ 2.94
RTN4R-201ENST00000043402 C8orf34Q49A92 452 aa33.41■■■□□ 2.94
RTN4R-201ENST00000043402 USP31Q70CQ4 1352 aa33.4■■■□□ 2.94
RTN4R-201ENST00000043402 NOB1Q9ULX3 412 aaKnown RBP33.4■■■□□ 2.94
RTN4R-201ENST00000043402 KCNA6P17658 529 aa33.39■■■□□ 2.94
RTN4R-201ENST00000043402 FAM161AQ3B820 660 aa33.39■■■□□ 2.94
RTN4R-201ENST00000043402 PEAK1Q9H792 1746 aa33.39■■■□□ 2.94
RTN4R-201ENST00000043402 ATF7IPQ6VMQ6 1270 aa33.38■■■□□ 2.93
RTN4R-201ENST00000043402 RIMS1Q86UR5 1692 aaKnown RBP33.37■■■□□ 2.93
RTN4R-201ENST00000043402 AEBP1Q8IUX7 1158 aa33.36■■■□□ 2.93
RTN4R-201ENST00000043402 ZNF853P0CG23 659 aa33.36■■■□□ 2.93
RTN4R-201ENST00000043402 CALD1Q05682 793 aaKnown RBP33.36■■■□□ 2.93
RTN4R-201ENST00000043402 ALDH1L2Q3SY69 923 aa33.35■■■□□ 2.93
RTN4R-201ENST00000043402 HSP90AB2PQ58FF8 381 aa33.35■■■□□ 2.93
RTN4R-201ENST00000043402 IFT57Q9NWB7 429 aa33.35■■■□□ 2.93
RTN4R-201ENST00000043402 ZBTB47Q9UFB7 747 aaPredicted RBP33.35■■■□□ 2.93
RTN4R-201ENST00000043402 TTC21AQ8NDW8 1320 aa33.35■■■□□ 2.93
RTN4R-201ENST00000043402 NGDNQ8NEJ9 315 aaKnown RBP33.33■■■□□ 2.93
RTN4R-201ENST00000043402 FAM83GA6ND36 823 aa33.33■■■□□ 2.93
RTN4R-201ENST00000043402 SOX12O15370 315 aa33.33■■■□□ 2.93
RTN4R-201ENST00000043402 GNAI1P63096 354 aa33.33■■■□□ 2.93
RTN4R-201ENST00000043402 SULT6B1Q6IMI4 303 aa33.33■■■□□ 2.93
RTN4R-201ENST00000043402 PIK3R4Q99570 1358 aa33.32■■■□□ 2.92
RTN4R-201ENST00000043402 KIF16BQ96L93 1317 aa33.31■■■□□ 2.92
RTN4R-201ENST00000043402 MBIPQ9NS73 344 aa33.31■■■□□ 2.92
RTN4R-201ENST00000043402 VAMP4O75379 141 aa33.3■■■□□ 2.92
RTN4R-201ENST00000043402 LMOD3Q0VAK6 560 aa33.3■■■□□ 2.92
RTN4R-201ENST00000043402 TSPYL6Q8N831 410 aa33.3■■■□□ 2.92
RTN4R-201ENST00000043402 ZNF428Q96B54 188 aa33.29■■■□□ 2.92
RTN4R-201ENST00000043402 RGPD1P0DJD0 1748 aa33.28■■■□□ 2.92
RTN4R-201ENST00000043402 ITPRIPQ8IWB1 547 aa33.28■■■□□ 2.92
RTN4R-201ENST00000043402 DCTN1Q14203 1278 aa33.28■■■□□ 2.92
RTN4R-201ENST00000043402 TMEM57Q8N5G2 664 aa33.28■■■□□ 2.92
RTN4R-201ENST00000043402 RWDD1Q9H446 243 aaPredicted RBP33.28■■■□□ 2.92
RTN4R-201ENST00000043402 DDX19BQ9UMR2 479 aa33.28■■■□□ 2.92
RTN4R-201ENST00000043402 MAP3K19Q56UN5 1328 aa33.28■■■□□ 2.92
RTN4R-201ENST00000043402 BRPF1P55201 1214 aaPredicted RBP33.27■■■□□ 2.92
RTN4R-201ENST00000043402 CFAP44Q96MT7 982 aa33.27■■■□□ 2.92
RTN4R-201ENST00000043402 IPO8O15397 1037 aaKnown RBP33.27■■■□□ 2.92
RTN4R-201ENST00000043402 ANKARQ7Z5J8 1434 aa33.26■■■□□ 2.92
RTN4R-201ENST00000043402 PIK3C2AO00443 1686 aa33.26■■■□□ 2.92
RTN4R-201ENST00000043402 FMN2Q9NZ56 1722 aa33.24■■■□□ 2.91
RTN4R-201ENST00000043402 PDZRN3Q9UPQ7 1066 aa33.23■■■□□ 2.91
RTN4R-201ENST00000043402 ELL2O00472 640 aaPredicted RBP33.22■■■□□ 2.91
RTN4R-201ENST00000043402 ANKLE2Q86XL3 938 aa33.22■■■□□ 2.91
RTN4R-201ENST00000043402 MRPL50Q8N5N7 158 aaKnown RBP33.21■■■□□ 2.91
RTN4R-201ENST00000043402 CHD2O14647 1828 aaKnown RBP33.21■■■□□ 2.91
RTN4R-201ENST00000043402 C8orf58Q8NAV2 365 aa33.2■■■□□ 2.91
RTN4R-201ENST00000043402 ZNF142P52746 1687 aaPredicted RBP33.2■■■□□ 2.91
RTN4R-201ENST00000043402 ZBTB40Q9NUA8 1239 aa33.19■■■□□ 2.9
RTN4R-201ENST00000043402 SBNO1A3KN83 1393 aa33.19■■■□□ 2.9
RTN4R-201ENST00000043402 TWISTNBQ3B726 338 aaPredicted RBP33.19■■■□□ 2.9
RTN4R-201ENST00000043402 VIRMAQ69YN4 1812 aaKnown RBP33.18■■■□□ 2.9
RTN4R-201ENST00000043402 FLT4P35916 1363 aa33.18■■■□□ 2.9
RTN4R-201ENST00000043402 ADAMTSL3P82987 1691 aa33.18■■■□□ 2.9
RTN4R-201ENST00000043402 HDAC1Q13547 482 aaPredicted RBP33.16■■■□□ 2.9
RTN4R-201ENST00000043402 NLRP6P59044 892 aa33.16■■■□□ 2.9
RTN4R-201ENST00000043402 ARHGEF10O15013 1369 aa33.15■■■□□ 2.9
RTN4R-201ENST00000043402 MARF1Q9Y4F3 1742 aaKnown RBP33.15■■■□□ 2.9
RTN4R-201ENST00000043402 MCM10Q7L590 875 aa33.13■■■□□ 2.89
RTN4R-201ENST00000043402 ARHGAP45Q92619 1136 aa33.13■■■□□ 2.89
RTN4R-201ENST00000043402 RBM33Q96EV2 1170 aaKnown RBP33.13■■■□□ 2.89
RTN4R-201ENST00000043402 AMPHP49418 695 aa33.12■■■□□ 2.89
RTN4R-201ENST00000043402 NUTM2GQ5VZR2 741 aa33.12■■■□□ 2.89
RTN4R-201ENST00000043402 SETD1BQ9UPS6 1966 aaKnown RBP33.11■■■□□ 2.89
RTN4R-201ENST00000043402 DDRGK1Q96HY6 314 aa33.1■■■□□ 2.89
RTN4R-201ENST00000043402 KDRP35968 1356 aa33.09■■■□□ 2.89
RTN4R-201ENST00000043402 CHL1O00533 1208 aa33.09■■■□□ 2.89
RTN4R-201ENST00000043402 EYA1Q99502 592 aa33.09■■■□□ 2.89
RTN4R-201ENST00000043402 IGSF1Q8N6C5 1336 aa33.07■■■□□ 2.88
RTN4R-201ENST00000043402 USP54Q70EL1 1684 aa33.07■■■□□ 2.88
RTN4R-201ENST00000043402 ABTB2Q8N961 1025 aa33.07■■■□□ 2.88
RTN4R-201ENST00000043402 FOXO3O43524 673 aa33.06■■■□□ 2.88
RTN4R-201ENST00000043402 ZBTB7BO15156 539 aaPredicted RBP33.06■■■□□ 2.88
RTN4R-201ENST00000043402 SEC24BO95487 1268 aa33.06■■■□□ 2.88
RTN4R-201ENST00000043402 MTHFSDQ2M296 383 aaKnown RBP33.06■■■□□ 2.88
RTN4R-201ENST00000043402 KRT24Q2M2I5 525 aa33.06■■■□□ 2.88
RTN4R-201ENST00000043402 SMC5Q8IY18 1101 aa33.05■■■□□ 2.88
RTN4R-201ENST00000043402 PHF8Q9UPP1 1060 aa33.05■■■□□ 2.88
RTN4R-201ENST00000043402 ABCC4O15439 1325 aa33.04■■■□□ 2.88
RTN4R-201ENST00000043402 USP19O94966 1318 aa33.04■■■□□ 2.88
RTN4R-201ENST00000043402 CRB1P82279 1406 aa33.04■■■□□ 2.88
RTN4R-201ENST00000043402 HOXC9P31274 260 aa33.03■■■□□ 2.88
RTN4R-201ENST00000043402 KIF24Q5T7B8 1368 aa33■■■□□ 2.87
RTN4R-201ENST00000043402 NBR1Q14596 966 aa33■■■□□ 2.87
RTN4R-201ENST00000043402 ADGRL3Q9HAR2 1447 aa32.99■■■□□ 2.87
RTN4R-201ENST00000043402 KIAA0232Q92628 1395 aa32.98■■■□□ 2.87
RTN4R-201ENST00000043402 NWD1Q149M9 1564 aa32.97■■■□□ 2.87
RTN4R-201ENST00000043402 NPHP4O75161 1426 aaPredicted RBP32.96■■■□□ 2.87
RTN4R-201ENST00000043402 API5Q9BZZ5 524 aaKnown RBP32.96■■■□□ 2.87
RTN4R-201ENST00000043402 C14orf37Q86TY3 774 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms