RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 KTN1Q86UP2 1357 aaKnown RBP22.61■■□□□ 1.21
ERCC1-201ENST00000013807 NFAT5O94916 1531 aa22.6■■□□□ 1.21
ERCC1-201ENST00000013807 USP31Q70CQ4 1352 aa22.6■■□□□ 1.21
ERCC1-201ENST00000013807 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
ERCC1-201ENST00000013807 WDR17Q8IZU2 1322 aa22.59■■□□□ 1.21
ERCC1-201ENST00000013807 EZH2Q15910 746 aaKnown RBP22.59■■□□□ 1.21
ERCC1-201ENST00000013807 LRRC37A3O60309 1634 aa22.58■■□□□ 1.21
ERCC1-201ENST00000013807 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
ERCC1-201ENST00000013807 RGPD3A6NKT7 1758 aaPredicted RBP22.56■■□□□ 1.2
ERCC1-201ENST00000013807 RGPD4Q7Z3J3 1758 aa22.56■■□□□ 1.2
ERCC1-201ENST00000013807 APBA3O96018 575 aa22.56■■□□□ 1.2
ERCC1-201ENST00000013807 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
ERCC1-201ENST00000013807 PSDA5PKW4 1024 aaPredicted RBP22.55■■□□□ 1.2
ERCC1-201ENST00000013807 CDCA7Q9BWT1 371 aaPredicted RBP22.55■■□□□ 1.2
ERCC1-201ENST00000013807 TOM1L2Q6ZVM7 507 aa22.54■■□□□ 1.2
ERCC1-201ENST00000013807 OVOS2A0A0G2JMS6 1433 aa22.54■■□□□ 1.2
ERCC1-201ENST00000013807 OVOS2A0A0J9YW53 1432 aa22.54■■□□□ 1.2
ERCC1-201ENST00000013807 BCL9O00512 1426 aa22.54■■□□□ 1.2
ERCC1-201ENST00000013807 OVOS2Q6IE36 1432 aa22.54■■□□□ 1.2
ERCC1-201ENST00000013807 CARD10Q9BWT7 1032 aa22.53■■□□□ 1.2
ERCC1-201ENST00000013807 LTN1O94822 1766 aa22.53■■□□□ 1.2
ERCC1-201ENST00000013807 ZBTB7CA1YPR0 619 aa22.51■■□□□ 1.19
ERCC1-201ENST00000013807 SLC24A1O60721 1099 aa22.51■■□□□ 1.19
ERCC1-201ENST00000013807 DDB1Q16531 1140 aa22.51■■□□□ 1.19
ERCC1-201ENST00000013807 EDC4Q6P2E9 1401 aaKnown RBP22.5■■□□□ 1.19
ERCC1-201ENST00000013807 R3HDM1Q15032 1099 aaKnown RBP22.5■■□□□ 1.19
ERCC1-201ENST00000013807 TESK2Q96S53 571 aa22.5■■□□□ 1.19
ERCC1-201ENST00000013807 SLC12A5Q9H2X9 1139 aa22.5■■□□□ 1.19
ERCC1-201ENST00000013807 PLSCR1O15162 318 aa22.49■■□□□ 1.19
ERCC1-201ENST00000013807 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
ERCC1-201ENST00000013807 HDGFL2Q7Z4V5 671 aaPredicted RBP22.48■■□□□ 1.19
ERCC1-201ENST00000013807 TERF2IPQ9NYB0 399 aa22.48■■□□□ 1.19
ERCC1-201ENST00000013807 CCDC7Q96M83 1385 aa22.48■■□□□ 1.19
ERCC1-201ENST00000013807 NINLQ9Y2I6 1382 aa22.48■■□□□ 1.19
ERCC1-201ENST00000013807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.47■■□□□ 1.19
ERCC1-201ENST00000013807 NME9Q86XW9 330 aa22.46■■□□□ 1.19
ERCC1-201ENST00000013807 MARCH10Q8NA82 808 aaPredicted RBP22.46■■□□□ 1.19
ERCC1-201ENST00000013807 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
ERCC1-201ENST00000013807 A0A1W2PP64 1363 aa22.46■■□□□ 1.19
ERCC1-201ENST00000013807 BCL11BQ9C0K0 894 aaPredicted RBP22.45■■□□□ 1.18
ERCC1-201ENST00000013807 ST20-MTHFSA0A0A6YYL1 179 aa22.44■■□□□ 1.18
ERCC1-201ENST00000013807 SOX12O15370 315 aa22.44■■□□□ 1.18
ERCC1-201ENST00000013807 ERBB3P21860 1342 aa22.44■■□□□ 1.18
ERCC1-201ENST00000013807 CSB-PGBD3P0DP91 1061 aa22.43■■□□□ 1.18
ERCC1-201ENST00000013807 NBPF14Q5TI25 921 aa22.43■■□□□ 1.18
ERCC1-201ENST00000013807 EXOC5O00471 708 aa22.41■■□□□ 1.18
ERCC1-201ENST00000013807 FAM208AQ9UK61 1670 aaKnown RBP22.39■■□□□ 1.17
ERCC1-201ENST00000013807 TNS2Q63HR2 1409 aa22.39■■□□□ 1.17
ERCC1-201ENST00000013807 PTF1AQ7RTS3 328 aa22.37■■□□□ 1.17
ERCC1-201ENST00000013807 KAT6BQ8WYB5 2073 aa22.36■■□□□ 1.17
ERCC1-201ENST00000013807 PROM2Q8N271 834 aa22.36■■□□□ 1.17
ERCC1-201ENST00000013807 NHSQ6T4R5 1651 aa22.36■■□□□ 1.17
ERCC1-201ENST00000013807 IP6K1Q92551 441 aa22.35■■□□□ 1.17
ERCC1-201ENST00000013807 ANKRD24Q8TF21 1146 aa22.34■■□□□ 1.17
ERCC1-201ENST00000013807 ANKRD36BQ8N2N9 1353 aa22.34■■□□□ 1.17
ERCC1-201ENST00000013807 IL2RBP14784 551 aa22.33■■□□□ 1.17
ERCC1-201ENST00000013807 NLRP2Q9NX02 1062 aa22.33■■□□□ 1.17
ERCC1-201ENST00000013807 TIMELESSQ9UNS1 1208 aa22.33■■□□□ 1.17
ERCC1-201ENST00000013807 CASZ1Q86V15 1759 aa22.33■■□□□ 1.16
ERCC1-201ENST00000013807 USP47Q96K76 1375 aa22.31■■□□□ 1.16
ERCC1-201ENST00000013807 TMF1P82094 1093 aa22.3■■□□□ 1.16
ERCC1-201ENST00000013807 COG3Q96JB2 828 aa22.3■■□□□ 1.16
ERCC1-201ENST00000013807 KCNQ2O43526 872 aa22.28■■□□□ 1.16
ERCC1-201ENST00000013807 TXNRD1Q16881 649 aa22.28■■□□□ 1.16
ERCC1-201ENST00000013807 SPON1Q9HCB6 807 aa22.28■■□□□ 1.16
ERCC1-201ENST00000013807 ANO8Q9HCE9 1232 aaPredicted RBP22.28■■□□□ 1.16
ERCC1-201ENST00000013807 BTAF1O14981 1849 aa22.28■■□□□ 1.16
ERCC1-201ENST00000013807 MAP3K19Q56UN5 1328 aa22.28■■□□□ 1.16
ERCC1-201ENST00000013807 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
ERCC1-201ENST00000013807 RGPD2P0DJD1 1756 aa22.27■■□□□ 1.16
ERCC1-201ENST00000013807 FYB1O15117 783 aa22.26■■□□□ 1.15
ERCC1-201ENST00000013807 HOXC9P31274 260 aa22.25■■□□□ 1.15
ERCC1-201ENST00000013807 CDCA8Q53HL2 280 aa22.25■■□□□ 1.15
ERCC1-201ENST00000013807 KIF20BQ96Q89 1820 aa22.24■■□□□ 1.15
ERCC1-201ENST00000013807 RTL1A6NKG5 1358 aa22.24■■□□□ 1.15
ERCC1-201ENST00000013807 SHANK3Q9BYB0 1731 aa22.23■■□□□ 1.15
ERCC1-201ENST00000013807 PAPPAQ13219 1627 aa22.22■■□□□ 1.15
ERCC1-201ENST00000013807 MYOM1P52179 1685 aa22.22■■□□□ 1.15
ERCC1-201ENST00000013807 SLC15A2Q16348 729 aa22.21■■□□□ 1.15
ERCC1-201ENST00000013807 FBLN1P23142 703 aa22.2■■□□□ 1.14
ERCC1-201ENST00000013807 AMPHP49418 695 aa22.2■■□□□ 1.14
ERCC1-201ENST00000013807 ACSBG1Q96GR2 724 aa22.19■■□□□ 1.14
ERCC1-201ENST00000013807 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
ERCC1-201ENST00000013807 PDGFDQ9GZP0 370 aaPredicted RBP22.18■■□□□ 1.14
ERCC1-201ENST00000013807 STK32BQ9NY57 414 aa22.18■■□□□ 1.14
ERCC1-201ENST00000013807 LTV1Q96GA3 475 aaPredicted RBP22.17■■□□□ 1.14
ERCC1-201ENST00000013807 GGNBP2Q9H3C7 697 aa22.17■■□□□ 1.14
ERCC1-201ENST00000013807 QSER1Q2KHR3 1735 aa22.17■■□□□ 1.14
ERCC1-201ENST00000013807 LY75O60449 1722 aa22.15■■□□□ 1.14
ERCC1-201ENST00000013807 CGNL1Q0VF96 1302 aa22.15■■□□□ 1.14
ERCC1-201ENST00000013807 CARD14Q9BXL6 1004 aa22.15■■□□□ 1.14
ERCC1-201ENST00000013807 INSRP06213 1382 aa22.14■■□□□ 1.14
ERCC1-201ENST00000013807 PTGER2P43116 358 aa22.14■■□□□ 1.13
ERCC1-201ENST00000013807 RRS1Q15050 365 aaKnown RBP22.14■■□□□ 1.13
ERCC1-201ENST00000013807 PPP1R1BQ9UD71 204 aaPredicted RBP22.14■■□□□ 1.13
ERCC1-201ENST00000013807 DOT1LQ8TEK3 1739 aa22.14■■□□□ 1.13
ERCC1-201ENST00000013807 MEGF6O75095 1541 aa22.13■■□□□ 1.13
ERCC1-201ENST00000013807 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
ERCC1-201ENST00000013807 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
ERCC1-201ENST00000013807 DDX54Q8TDD1 881 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms