RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 USP35Q9P2H5 1018 aa34.91■■■■□ 3.18
TSR3-201ENST00000007390 THRAP3Q9Y2W1 955 aaKnown RBP34.91■■■■□ 3.18
TSR3-201ENST00000007390 ABCC6O95255 1503 aa34.91■■■■□ 3.18
TSR3-201ENST00000007390 ANKRD36BQ8N2N9 1353 aa34.89■■■■□ 3.18
TSR3-201ENST00000007390 SOX12O15370 315 aa34.89■■■■□ 3.18
TSR3-201ENST00000007390 AXIN2Q9Y2T1 843 aa34.88■■■■□ 3.17
TSR3-201ENST00000007390 OVOS2A0A0J9YW53 1432 aa34.88■■■■□ 3.17
TSR3-201ENST00000007390 OVOS2Q6IE36 1432 aa34.88■■■■□ 3.17
TSR3-201ENST00000007390 WDR17Q8IZU2 1322 aa34.84■■■■□ 3.17
TSR3-201ENST00000007390 SF3B2Q13435 895 aaKnown RBP34.8■■■■□ 3.16
TSR3-201ENST00000007390 TOM1L2Q6ZVM7 507 aa34.79■■■■□ 3.16
TSR3-201ENST00000007390 PARP4Q9UKK3 1724 aaKnown RBP34.78■■■■□ 3.16
TSR3-201ENST00000007390 FAM182BQ5T319 152 aa34.78■■■■□ 3.16
TSR3-201ENST00000007390 RGPD5Q99666 1765 aa34.77■■■■□ 3.16
TSR3-201ENST00000007390 PDE3BQ13370 1112 aa34.74■■■■□ 3.15
TSR3-201ENST00000007390 FAM196AQ6ZSG2 479 aa34.74■■■■□ 3.15
TSR3-201ENST00000007390 CARD10Q9BWT7 1032 aa34.74■■■■□ 3.15
TSR3-201ENST00000007390 LTN1O94822 1766 aa34.74■■■■□ 3.15
TSR3-201ENST00000007390 DEFB132Q7Z7B7 95 aa34.73■■■■□ 3.15
TSR3-201ENST00000007390 COG3Q96JB2 828 aa34.73■■■■□ 3.15
TSR3-201ENST00000007390 MYOM1P52179 1685 aa34.73■■■■□ 3.15
TSR3-201ENST00000007390 RGPD1P0DJD0 1748 aa34.72■■■■□ 3.15
TSR3-201ENST00000007390 EIF4G2P78344 907 aaKnown RBP eCLIP34.72■■■■□ 3.15
TSR3-201ENST00000007390 CSB-PGBD3P0DP91 1061 aa34.71■■■■□ 3.15
TSR3-201ENST00000007390 CDCA7Q9BWT1 371 aaPredicted RBP34.7■■■■□ 3.15
TSR3-201ENST00000007390 ERBB3P21860 1342 aa34.7■■■■□ 3.15
TSR3-201ENST00000007390 WNK3Q9BYP7 1800 aa34.69■■■■□ 3.14
TSR3-201ENST00000007390 LRRC37A3O60309 1634 aa34.68■■■■□ 3.14
TSR3-201ENST00000007390 BAG6P46379 1132 aa34.68■■■■□ 3.14
TSR3-201ENST00000007390 CCDC7Q96M83 1385 aa34.68■■■■□ 3.14
TSR3-201ENST00000007390 DISP2A7MBM2 1401 aa34.67■■■■□ 3.14
TSR3-201ENST00000007390 FYB1O15117 783 aa34.67■■■■□ 3.14
TSR3-201ENST00000007390 HSPA5P11021 654 aaKnown RBP34.66■■■■□ 3.14
TSR3-201ENST00000007390 TNS1Q9HBL0 1735 aaKnown RBP34.66■■■■□ 3.14
TSR3-201ENST00000007390 DDB1Q16531 1140 aa34.64■■■■□ 3.14
TSR3-201ENST00000007390 C11orf95C9JLR9 678 aaPredicted RBP34.63■■■■□ 3.13
TSR3-201ENST00000007390 IP6K1Q92551 441 aa34.63■■■■□ 3.13
TSR3-201ENST00000007390 CARD14Q9BXL6 1004 aa34.62■■■■□ 3.13
TSR3-201ENST00000007390 MAP3K19Q56UN5 1328 aa34.61■■■■□ 3.13
TSR3-201ENST00000007390 ANKRD24Q8TF21 1146 aa34.61■■■■□ 3.13
TSR3-201ENST00000007390 GGNBP2Q9H3C7 697 aa34.61■■■■□ 3.13
TSR3-201ENST00000007390 TRIM37O94972 964 aa34.6■■■■□ 3.13
TSR3-201ENST00000007390 OVOS2A0A0G2JMS6 1433 aa34.6■■■■□ 3.13
TSR3-201ENST00000007390 PEAK1Q9H792 1746 aa34.59■■■■□ 3.13
TSR3-201ENST00000007390 NSD3Q9BZ95 1437 aa34.59■■■■□ 3.13
TSR3-201ENST00000007390 KIF20BQ96Q89 1820 aa34.59■■■■□ 3.13
TSR3-201ENST00000007390 NLRP2Q9NX02 1062 aa34.57■■■■□ 3.12
TSR3-201ENST00000007390 RTL1A6NKG5 1358 aa34.56■■■■□ 3.12
TSR3-201ENST00000007390 EN1Q05925 392 aaPredicted RBP34.55■■■■□ 3.12
TSR3-201ENST00000007390 HOXC9P31274 260 aa34.54■■■■□ 3.12
TSR3-201ENST00000007390 FBLN1P23142 703 aa34.53■■■■□ 3.12
TSR3-201ENST00000007390 BCL9O00512 1426 aa34.53■■■■□ 3.12
TSR3-201ENST00000007390 TNS2Q63HR2 1409 aa34.53■■■■□ 3.12
TSR3-201ENST00000007390 FAM208AQ9UK61 1670 aaKnown RBP34.53■■■■□ 3.12
TSR3-201ENST00000007390 AMPHP49418 695 aa34.52■■■■□ 3.12
TSR3-201ENST00000007390 MARCH10Q8NA82 808 aaPredicted RBP34.51■■■■□ 3.12
TSR3-201ENST00000007390 PARD3Q8TEW0 1356 aa34.5■■■■□ 3.11
TSR3-201ENST00000007390 EXOC5O00471 708 aa34.5■■■■□ 3.11
TSR3-201ENST00000007390 SRCAPQ6ZRS2 3230 aa34.49■■■■□ 3.11
TSR3-201ENST00000007390 APBA3O96018 575 aa34.49■■■■□ 3.11
TSR3-201ENST00000007390 POLR3GLQ9BT43 218 aa34.49■■■■□ 3.11
TSR3-201ENST00000007390 IL2RBP14784 551 aa34.48■■■■□ 3.11
TSR3-201ENST00000007390 RRS1Q15050 365 aaKnown RBP34.48■■■■□ 3.11
TSR3-201ENST00000007390 CAMKK2Q96RR4 588 aa34.48■■■■□ 3.11
TSR3-201ENST00000007390 CGNL1Q0VF96 1302 aa34.48■■■■□ 3.11
TSR3-201ENST00000007390 KIF24Q5T7B8 1368 aa34.47■■■■□ 3.11
TSR3-201ENST00000007390 LTV1Q96GA3 475 aaPredicted RBP34.45■■■■□ 3.11
TSR3-201ENST00000007390 EZH2Q15910 746 aaKnown RBP34.44■■■■□ 3.1
TSR3-201ENST00000007390 SBF2Q86WG5 1849 aa34.44■■■■□ 3.1
TSR3-201ENST00000007390 INSRP06213 1382 aa34.4■■■■□ 3.1
TSR3-201ENST00000007390 FLT4P35916 1363 aa34.4■■■■□ 3.1
TSR3-201ENST00000007390 BCL11BQ9C0K0 894 aaPredicted RBP34.39■■■■□ 3.1
TSR3-201ENST00000007390 SMG6Q86US8 1419 aaKnown RBP34.38■■■■□ 3.09
TSR3-201ENST00000007390 RREB1Q92766 1687 aa34.38■■■■□ 3.09
TSR3-201ENST00000007390 PANK3Q9H999 370 aa34.37■■■■□ 3.09
TSR3-201ENST00000007390 RGPD3A6NKT7 1758 aaPredicted RBP34.35■■■■□ 3.09
TSR3-201ENST00000007390 RGPD4Q7Z3J3 1758 aa34.35■■■■□ 3.09
TSR3-201ENST00000007390 HSP90AB2PQ58FF8 381 aa34.34■■■■□ 3.09
TSR3-201ENST00000007390 ANKRD26Q9UPS8 1709 aa34.34■■■■□ 3.09
TSR3-201ENST00000007390 PLSCR1O15162 318 aa34.33■■■■□ 3.09
TSR3-201ENST00000007390 EMILIN1Q9Y6C2 1016 aa34.33■■■■□ 3.09
TSR3-201ENST00000007390 RGPD2P0DJD1 1756 aa34.32■■■■□ 3.08
TSR3-201ENST00000007390 PTF1AQ7RTS3 328 aa34.32■■■■□ 3.08
TSR3-201ENST00000007390 NBPF6Q5VWK0 638 aa34.31■■■■□ 3.08
TSR3-201ENST00000007390 NBPF4Q96M43 638 aa34.31■■■■□ 3.08
TSR3-201ENST00000007390 NUP188Q5SRE5 1749 aa34.3■■■■□ 3.08
TSR3-201ENST00000007390 NSD2O96028 1365 aa34.3■■■■□ 3.08
TSR3-201ENST00000007390 KIF7Q2M1P5 1343 aa34.29■■■■□ 3.08
TSR3-201ENST00000007390 PSDA5PKW4 1024 aaPredicted RBP34.28■■■■□ 3.08
TSR3-201ENST00000007390 MEGF6O75095 1541 aa34.28■■■■□ 3.08
TSR3-201ENST00000007390 NHSQ6T4R5 1651 aa34.28■■■■□ 3.08
TSR3-201ENST00000007390 WASHC2AQ641Q2 1341 aa34.26■■■■□ 3.07
TSR3-201ENST00000007390 R3HDM1Q15032 1099 aaKnown RBP34.25■■■■□ 3.07
TSR3-201ENST00000007390 POLKQ9UBT6 870 aa34.24■■■■□ 3.07
TSR3-201ENST00000007390 PPM1GO15355 546 aaPredicted RBP34.22■■■■□ 3.07
TSR3-201ENST00000007390 KCNQ2O43526 872 aa34.22■■■■□ 3.07
TSR3-201ENST00000007390 USHBP1Q8N6Y0 703 aa34.22■■■■□ 3.07
TSR3-201ENST00000007390 MAP2P11137 1827 aaKnown RBP34.21■■■■□ 3.07
TSR3-201ENST00000007390 ZCRB1Q8TBF4 217 aaKnown RBP34.21■■■■□ 3.07
TSR3-201ENST00000007390 DDX54Q8TDD1 881 aaKnown RBP34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms