RNA–Protein interactions for RNA: ENSMUST00000173600.1

Ltb-203, Transcript of Lymphotoxin-beta, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ltb, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-203ENSMUST00000173600 CrklP47941 303 aa29.23■■■□□ 2.27
Ltb-203ENSMUST00000173600 OptnQ8K3K8 584 aa29.22■■■□□ 2.27
Ltb-203ENSMUST00000173600 FocadA2AKG8 1798 aa29.21■■■□□ 2.27
Ltb-203ENSMUST00000173600 Vps33bP59016 617 aa29.2■■■□□ 2.26
Ltb-203ENSMUST00000173600 Ddb1Q3U1J4 1140 aaKnown RBP29.2■■■□□ 2.26
Ltb-203ENSMUST00000173600 Lrit1Q8K099 624 aa29.2■■■□□ 2.26
Ltb-203ENSMUST00000173600 Slit1Q80TR4 1531 aa29.2■■■□□ 2.26
Ltb-203ENSMUST00000173600 Slc4a1apE9PX68 744 aa29.18■■■□□ 2.26
Ltb-203ENSMUST00000173600 GalcP54818 684 aa29.17■■■□□ 2.26
Ltb-203ENSMUST00000173600 Slc24a1Q91WD8 1130 aa29.17■■■□□ 2.26
Ltb-203ENSMUST00000173600 Zcrb1Q9CZ96 217 aaKnown RBP29.17■■■□□ 2.26
Ltb-203ENSMUST00000173600 Ezh2Q61188 746 aaKnown RBP29.14■■■□□ 2.26
Ltb-203ENSMUST00000173600 Zpr1Q62384 459 aa29.14■■■□□ 2.26
Ltb-203ENSMUST00000173600 Ppfibp2O35711 882 aa29.13■■■□□ 2.25
Ltb-203ENSMUST00000173600 PsdQ5DTT2 1024 aa29.13■■■□□ 2.25
Ltb-203ENSMUST00000173600 Rapgefl1Q68EF8 662 aa29.12■■■□□ 2.25
Ltb-203ENSMUST00000173600 Ginm1Q91WR6 327 aa29.12■■■□□ 2.25
Ltb-203ENSMUST00000173600 Mst1rQ62190 1378 aa29.12■■■□□ 2.25
Ltb-203ENSMUST00000173600 En2P09066 324 aa29.11■■■□□ 2.25
Ltb-203ENSMUST00000173600 Sik1Q60670 779 aa29.11■■■□□ 2.25
Ltb-203ENSMUST00000173600 Plekhd1B2RPU2 505 aa29.1■■■□□ 2.25
Ltb-203ENSMUST00000173600 Birc3O08863 600 aa29.09■■■□□ 2.25
Ltb-203ENSMUST00000173600 Magea1O89006 320 aa29.09■■■□□ 2.25
Ltb-203ENSMUST00000173600 Magea5O89009 320 aa29.09■■■□□ 2.25
Ltb-203ENSMUST00000173600 Vars2Q3U2A8 1060 aa29.09■■■□□ 2.25
Ltb-203ENSMUST00000173600 Magea2Q9R2A2 320 aa29.09■■■□□ 2.25
Ltb-203ENSMUST00000173600 Cwc22Q8C5N3 908 aaKnown RBP29.08■■■□□ 2.25
Ltb-203ENSMUST00000173600 Erbb3Q61526 1339 aa29.08■■■□□ 2.25
Ltb-203ENSMUST00000173600 Rab3gap2Q8BMG7 1366 aa29.08■■■□□ 2.25
Ltb-203ENSMUST00000173600 Hoxc9P09633 260 aa29.07■■■□□ 2.24
Ltb-203ENSMUST00000173600 Zranb3Q6NZP1 1069 aa29.07■■■□□ 2.24
Ltb-203ENSMUST00000173600 Snapc4Q8BP86 1333 aa29.06■■■□□ 2.24
Ltb-203ENSMUST00000173600 Exoc5Q3TPX4 708 aa29.06■■■□□ 2.24
Ltb-203ENSMUST00000173600 Scaf1Q5U4C3 1256 aaKnown RBP29.05■■■□□ 2.24
Ltb-203ENSMUST00000173600 Bsdc1Q80Y55 427 aa29.05■■■□□ 2.24
Ltb-203ENSMUST00000173600 Col15a1O35206 1367 aa29.02■■■□□ 2.24
Ltb-203ENSMUST00000173600 Pnpla7A2AJ88 1352 aa29.01■■■□□ 2.23
Ltb-203ENSMUST00000173600 Fam184bQ0KK56 942 aa28.99■■■□□ 2.23
Ltb-203ENSMUST00000173600 Sin3aQ60520 1274 aaKnown RBP28.99■■■□□ 2.23
Ltb-203ENSMUST00000173600 Kcnh4A2A5F7 1018 aa28.98■■■□□ 2.23
Ltb-203ENSMUST00000173600 Gpr150Q8BL07 427 aa28.98■■■□□ 2.23
Ltb-203ENSMUST00000173600 TkfcQ8VC30 578 aa28.98■■■□□ 2.23
Ltb-203ENSMUST00000173600 Arhgap33Q80YF9 1305 aa28.97■■■□□ 2.23
Ltb-203ENSMUST00000173600 Cc2d1aQ8K1A6 943 aa28.97■■■□□ 2.23
Ltb-203ENSMUST00000173600 Ptpn23Q6PB44 1692 aa28.96■■■□□ 2.23
Ltb-203ENSMUST00000173600 Gm10471E9Q1C7 252 aa28.96■■■□□ 2.23
Ltb-203ENSMUST00000173600 Ccne1Q61457 408 aa28.96■■■□□ 2.23
Ltb-203ENSMUST00000173600 Ahnak2E9PYB0 1738 aaKnown RBP28.96■■■□□ 2.23
Ltb-203ENSMUST00000173600 Arfgef2A2A5R2 1792 aa28.96■■■□□ 2.23
Ltb-203ENSMUST00000173600 Nsd3Q6P2L6 1439 aa28.94■■■□□ 2.22
Ltb-203ENSMUST00000173600 Adgrb1Q3UHD1 1582 aa28.93■■■□□ 2.22
Ltb-203ENSMUST00000173600 Pim2Q62070 370 aa28.93■■■□□ 2.22
Ltb-203ENSMUST00000173600 IbtkQ6ZPR6 1352 aaKnown RBP28.92■■■□□ 2.22
Ltb-203ENSMUST00000173600 Yy1Q00899 414 aa28.92■■■□□ 2.22
Ltb-203ENSMUST00000173600 PrxO55103 1391 aa28.91■■■□□ 2.22
Ltb-203ENSMUST00000173600 Ppef1O35655 650 aa28.91■■■□□ 2.22
Ltb-203ENSMUST00000173600 Smg6P61406 1418 aaKnown RBP28.9■■■□□ 2.22
Ltb-203ENSMUST00000173600 Afg3l2Q8JZQ2 802 aaKnown RBP28.9■■■□□ 2.22
Ltb-203ENSMUST00000173600 Ccdc85cE9Q6B2 420 aa28.89■■■□□ 2.22
Ltb-203ENSMUST00000173600 Hoxb7P09024 217 aa28.89■■■□□ 2.22
Ltb-203ENSMUST00000173600 Fam50bQ9WTJ8 334 aa28.89■■■□□ 2.22
Ltb-203ENSMUST00000173600 Pank3Q8R2W9 370 aa28.88■■■□□ 2.21
Ltb-203ENSMUST00000173600 Elp1Q7TT37 1333 aaKnown RBP28.88■■■□□ 2.21
Ltb-203ENSMUST00000173600 Parp14Q2EMV9 1817 aa28.87■■■□□ 2.21
Ltb-203ENSMUST00000173600 Q8BT18 775 aa28.87■■■□□ 2.21
Ltb-203ENSMUST00000173600 Dcaf11Q91VU6 549 aa28.85■■■□□ 2.21
Ltb-203ENSMUST00000173600 Tmf1B9EKI3 1091 aa28.84■■■□□ 2.21
Ltb-203ENSMUST00000173600 Zcwpw1Q6IR42 630 aa28.84■■■□□ 2.21
Ltb-203ENSMUST00000173600 Gm21680A0A0G2JGR8 267 aa28.83■■■□□ 2.21
Ltb-203ENSMUST00000173600 Ciz1Q8VEH2 845 aa28.83■■■□□ 2.21
Ltb-203ENSMUST00000173600 Inpp5dQ9ES52 1191 aa28.83■■■□□ 2.21
Ltb-203ENSMUST00000173600 Ubxn2bQ0KL01 331 aa28.82■■■□□ 2.2
Ltb-203ENSMUST00000173600 Abca3Q8R420 1704 aa28.8■■■□□ 2.2
Ltb-203ENSMUST00000173600 Aplp2Q06335 707 aa28.79■■■□□ 2.2
Ltb-203ENSMUST00000173600 Rad17Q6NXW6 688 aa28.79■■■□□ 2.2
Ltb-203ENSMUST00000173600 Simc1E9Q6E9 1354 aa28.78■■■□□ 2.2
Ltb-203ENSMUST00000173600 Speer4bQ9D9F7 267 aa28.78■■■□□ 2.2
Ltb-203ENSMUST00000173600 Sos2Q02384 1333 aa28.76■■■□□ 2.19
Ltb-203ENSMUST00000173600 Kdm6aO70546 1401 aa28.76■■■□□ 2.19
Ltb-203ENSMUST00000173600 Kcnq2Q9Z351 759 aa28.75■■■□□ 2.19
Ltb-203ENSMUST00000173600 Las1lA2BE28 776 aaKnown RBP28.74■■■□□ 2.19
Ltb-203ENSMUST00000173600 Ankrd13dQ6PD24 605 aa28.74■■■□□ 2.19
Ltb-203ENSMUST00000173600 Ppp1r37Q8BKR5 712 aa28.74■■■□□ 2.19
Ltb-203ENSMUST00000173600 Shank3Q4ACU6 1730 aa28.74■■■□□ 2.19
Ltb-203ENSMUST00000173600 Kif23E9Q5G3 953 aa28.72■■■□□ 2.19
Ltb-203ENSMUST00000173600 Eya1P97767 591 aa28.69■■■□□ 2.18
Ltb-203ENSMUST00000173600 Larp1Q6ZQ58 1072 aaKnown RBP28.69■■■□□ 2.18
Ltb-203ENSMUST00000173600 ThemisQ8BGW0 636 aa28.69■■■□□ 2.18
Ltb-203ENSMUST00000173600 4930572O03RikQ8C5Y0 211 aa28.69■■■□□ 2.18
Ltb-203ENSMUST00000173600 Eif4a2P10630 407 aa28.67■■■□□ 2.18
Ltb-203ENSMUST00000173600 Rps6ka4Q9Z2B9 773 aa28.67■■■□□ 2.18
Ltb-203ENSMUST00000173600 Zscan10Q3URR7 782 aa28.66■■■□□ 2.18
Ltb-203ENSMUST00000173600 ClspnQ80YR7 1315 aa28.66■■■□□ 2.18
Ltb-203ENSMUST00000173600 Fam198bQ3UPI1 517 aa28.65■■■□□ 2.18
Ltb-203ENSMUST00000173600 Plekhg5Q66T02 1073 aa28.65■■■□□ 2.18
Ltb-203ENSMUST00000173600 Kiaa0319lQ8K135 1048 aa28.65■■■□□ 2.18
Ltb-203ENSMUST00000173600 AtrnQ9WU60 1428 aa28.63■■■□□ 2.17
Ltb-203ENSMUST00000173600 ApobrQ8VBT6 942 aa28.63■■■□□ 2.17
Ltb-203ENSMUST00000173600 Akt1s1Q9D1F4 257 aa28.63■■■□□ 2.17
Ltb-203ENSMUST00000173600 Gprasp1Q5U4C1 1347 aa28.63■■■□□ 2.17
Retrieved 100 of 22,080 RNA–protein pairs in 77.9 ms