RNA–Protein interactions for RNA: ENSMUST00000130360.1

Synpo-206, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 5,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-206ENSMUST00000130360 Hnrnpul1Q8VDM6 859 aaKnown RBP19.54■□□□□ 0.72
Synpo-206ENSMUST00000130360 PaskQ8CEE6 1383 aa19.54■□□□□ 0.72
Synpo-206ENSMUST00000130360 Samd9lQ69Z37 1561 aa19.54■□□□□ 0.72
Synpo-206ENSMUST00000130360 Ptpdc1Q6NZK8 747 aa19.53■□□□□ 0.72
Synpo-206ENSMUST00000130360 Rhot2Q8JZN7 620 aa19.53■□□□□ 0.72
Synpo-206ENSMUST00000130360 SrrtQ99MR6 875 aaKnown RBP19.53■□□□□ 0.72
Synpo-206ENSMUST00000130360 Egfem1Q8C088 590 aa19.52■□□□□ 0.71
Synpo-206ENSMUST00000130360 Syce3B5KM66 88 aa19.51■□□□□ 0.71
Synpo-206ENSMUST00000130360 Dusp9Q7TNL7 452 aa19.51■□□□□ 0.71
Synpo-206ENSMUST00000130360 Pla2r1Q62028 1487 aa19.51■□□□□ 0.71
Synpo-206ENSMUST00000130360 Top1mtQ8R4U6 593 aa19.51■□□□□ 0.71
Synpo-206ENSMUST00000130360 Duxf3A0A0N4SV92 674 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 Gcom1E9PZ54 550 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 MyzapQ3UIJ9 466 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 Q3UPC7 1272 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 TmpoQ61033 693 aaKnown RBP19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 Kdm3bQ6ZPY7 1562 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 TnmdQ9EP64 317 aa19.5■□□□□ 0.71
Synpo-206ENSMUST00000130360 Sbno1Q689Z5 1390 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Fmnl2A2APV2 1086 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Tpm4Q6IRU2 248 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Krt85Q9Z2T6 507 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Cep57l1Q8VDS7 400 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ppp6r1Q7TSI3 856 aa19.49■□□□□ 0.71
Synpo-206ENSMUST00000130360 OptnQ8K3K8 584 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ftsj3Q9DBE9 838 aaKnown RBP19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Nup88Q8CEC0 753 aaKnown RBP19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ankrd44B2RXR6 993 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Cnnm3Q32NY4 713 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ddx19aQ61655 478 aaKnown RBP19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Wdr63B2RY71 923 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Dennd6aQ8BH65 605 aa19.48■□□□□ 0.71
Synpo-206ENSMUST00000130360 Tbc1d9Q3UYK3 1264 aa19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 TimelessQ9R1X4 1197 aa19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 Ggnbp2Q5SV77 696 aa19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 Rcan3Q9JKK0 239 aa19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 WizO88286 1684 aaKnown RBP19.47■□□□□ 0.71
Synpo-206ENSMUST00000130360 Cct4P80315 539 aaKnown RBP19.46■□□□□ 0.71
Synpo-206ENSMUST00000130360 FosbP13346 338 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Pmfbp1Q9WVQ0 1022 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Trappc8E9PWG2 1437 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Znf771Q8BJ90 317 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 TefQ9JLC6 301 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Atp10dQ8K2X1 1416 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Prkar2bP31324 416 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Me1P06801 572 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Bcl2l13P59017 434 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 TnikP83510 1323 aa19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Supt6hQ62383 1726 aaKnown RBP19.45■□□□□ 0.7
Synpo-206ENSMUST00000130360 Cbx1P83917 185 aaKnown RBP19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Zmym3Q9JLM4 1370 aa19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 CrcpO35427 148 aa19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gnl3lQ6PGG6 577 aaKnown RBP19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Bag4Q8CI61 457 aa19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Slc12a5Q91V14 1138 aa19.44■□□□□ 0.7
Synpo-206ENSMUST00000130360 Ppip5k1A2ARP1 1436 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Otud6bQ8K2H2 294 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 InsrP15208 1372 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Fkbp4P30416 458 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Babam1Q3UI43 333 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gimap6Q8K349 305 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Nkx1-2P42580 305 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Adgrl2Q8JZZ7 1487 aa19.43■□□□□ 0.7
Synpo-206ENSMUST00000130360 Hvcn1Q3U2S8 269 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gm10093D3YYI8 482 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gm10471E9Q1C7 252 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Hdac1O09106 482 aaKnown RBP19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Afap1Q80YS6 731 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Tmco3Q8BH01 678 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Odf2lQ9D478 642 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Stk38Q91VJ4 465 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Strn4P58404 760 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Rufy1Q8BIJ7 712 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Smc2Q8CG48 1191 aaKnown RBP19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 PxdnQ3UQ28 1475 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Adgrb2Q8CGM1 1561 aa19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Lmo7E9PYF4 1699 aaKnown RBP19.42■□□□□ 0.7
Synpo-206ENSMUST00000130360 Cavin1O54724 392 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Dnaaf4Q8R368 420 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Krt82Q99M74 516 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Fam135bQ9DAI6 1403 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Cfap58B2RW38 873 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Lrrc9Q8CDN9 1456 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 OvosQ3UU35 1456 aa19.41■□□□□ 0.7
Synpo-206ENSMUST00000130360 Mctp1E9PV86 951 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Disp1Q3TDN0 1521 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Cdk13Q69ZA1 1511 aaKnown RBP19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Trim29Q8R2Q0 587 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 PtprgQ05909 1442 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Wdr33Q8K4P0 1330 aaKnown RBP19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Kdm5bQ80Y84 1544 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Ssh2Q5SW75 1423 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 Kdm2bQ6P1G2 1309 aa19.4■□□□□ 0.7
Synpo-206ENSMUST00000130360 CalrP14211 416 aaKnown RBP19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 LifrP42703 1092 aa19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 Mapkbp1Q6NS57 1503 aa19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 Shroom2A2ALU4 1481 aa19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 Gapvd1Q6PAR5 1458 aa19.39■□□□□ 0.7
Synpo-206ENSMUST00000130360 Samm50Q8BGH2 469 aa19.39■□□□□ 0.69
Synpo-206ENSMUST00000130360 Def6Q8C2K1 630 aa19.39■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms