RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gimap6Q8K349 305 aa33.26■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Cabp2Q9JLK4 216 aa33.26■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Polr3glQ8R0C0 218 aa33.25■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Parp14Q2EMV9 1817 aa33.25■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Rbm25B2RY56 838 aaKnown RBP33.25■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Evi5lH3BKQ3 813 aa33.25■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Trim58Q5NCC9 485 aa33.25■■■□□ 2.91
Tpm1-216ENSMUST00000113707 TimelessQ9R1X4 1197 aa33.23■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Wnk3Q80XP9 1757 aa33.22■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Slit2Q9R1B9 1521 aa33.21■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Kcna6Q61923 529 aa33.2■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Trim26Q99PN3 545 aa33.2■■■□□ 2.91
Tpm1-216ENSMUST00000113707 Hoxc9P09633 260 aa33.19■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Ccdc171E9Q1U1 1324 aa33.19■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Ptpn23Q6PB44 1692 aa33.18■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Gnai1B2RSH2 354 aa33.18■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Ecm2Q5FW85 670 aa33.18■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Gnai3Q9DC51 354 aa33.18■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Cdc37l1Q9CZP7 335 aa33.17■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Plin1Q8CGN5 517 aa33.16■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Pank1Q8K4K6 548 aa33.15■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Supt16hQ920B9 1047 aa33.15■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Eya1P97767 591 aa33.14■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Farp2Q91VS8 1065 aa33.14■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Ltbp4Q8K4G1 1666 aa33.14■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Robo1O89026 1612 aa33.14■■■□□ 2.9
Tpm1-216ENSMUST00000113707 Nfat5Q9WV30 1534 aa33.13■■■□□ 2.89
Tpm1-216ENSMUST00000113707 AampJ3QN89 436 aa33.13■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Slc4a3P16283 1227 aa33.13■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Znf521Q6KAS7 1311 aa33.12■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Atf3Q60765 181 aa33.12■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Ccne1Q61457 408 aa33.12■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Kcnh5Q920E3 988 aa33.12■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Pip4k2bQ80XI4 416 aa33.1■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Rab11fip3Q8CHD8 1047 aa33.1■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Kdm2bQ6P1G2 1309 aa33.09■■■□□ 2.89
Tpm1-216ENSMUST00000113707 TmpoQ61033 693 aaKnown RBP33.09■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Ccdc60Q8C4J0 545 aa33.09■■■□□ 2.89
Tpm1-216ENSMUST00000113707 Sos1Q62245 1319 aa33.07■■■□□ 2.88
Tpm1-216ENSMUST00000113707 Tspyl2Q7TQI8 677 aa33.07■■■□□ 2.88
Tpm1-216ENSMUST00000113707 TatQ8QZR1 454 aa33.07■■■□□ 2.88
Tpm1-216ENSMUST00000113707 Tmem132eQ6IEE6 982 aa33.06■■■□□ 2.88
Tpm1-216ENSMUST00000113707 Zmym3Q9JLM4 1370 aa33.05■■■□□ 2.88
Tpm1-216ENSMUST00000113707 Siglec1Q62230 1695 aa33.05■■■□□ 2.88
Tpm1-216ENSMUST00000113707 G3bp1P97855 465 aaKnown RBP33.05■■■□□ 2.88
Tpm1-216ENSMUST00000113707 Trpm3Q5F4S9 1721 aa33.03■■■□□ 2.88
Tpm1-216ENSMUST00000113707 Fmnl2A2APV2 1086 aa33.01■■■□□ 2.88
Tpm1-216ENSMUST00000113707 Vamp4O70480 141 aa33.01■■■□□ 2.88
Tpm1-216ENSMUST00000113707 GnpatP98192 678 aa33.01■■■□□ 2.87
Tpm1-216ENSMUST00000113707 Usp16Q99LG0 825 aa32.99■■■□□ 2.87
Tpm1-216ENSMUST00000113707 HypkQ9CR41 129 aa32.98■■■□□ 2.87
Tpm1-216ENSMUST00000113707 Kdm6aO70546 1401 aa32.98■■■□□ 2.87
Tpm1-216ENSMUST00000113707 Gm6268A2A3U9 297 aa32.97■■■□□ 2.87
Tpm1-216ENSMUST00000113707 Dnajc10Q9DC23 793 aa32.97■■■□□ 2.87
Tpm1-216ENSMUST00000113707 Rtf1A2AQ19 715 aaKnown RBP32.95■■■□□ 2.87
Tpm1-216ENSMUST00000113707 Gsdma3Q5Y4Y6 464 aa32.95■■■□□ 2.87
Tpm1-216ENSMUST00000113707 Dzip1Q8BMD2 852 aa32.95■■■□□ 2.87
Tpm1-216ENSMUST00000113707 Amigo3Q8C2S7 508 aa32.95■■■□□ 2.86
Tpm1-216ENSMUST00000113707 U2surpQ6NV83 1029 aaKnown RBP32.93■■■□□ 2.86
Tpm1-216ENSMUST00000113707 Plekhm2Q80TQ5 1018 aa32.93■■■□□ 2.86
Tpm1-216ENSMUST00000113707 TnrQ8BYI9 1358 aa32.93■■■□□ 2.86
Tpm1-216ENSMUST00000113707 Tet3Q8BG87 1668 aa32.91■■■□□ 2.86
Tpm1-216ENSMUST00000113707 Duxf3A0A0N4SV92 674 aa32.91■■■□□ 2.86
Tpm1-216ENSMUST00000113707 Liat1Q810M6 228 aa32.91■■■□□ 2.86
Tpm1-216ENSMUST00000113707 Arfgef2A2A5R2 1792 aa32.91■■■□□ 2.86
Tpm1-216ENSMUST00000113707 Cavin2Q63918 418 aaKnown RBP32.91■■■□□ 2.86
Tpm1-216ENSMUST00000113707 Dixdc1Q80Y83 711 aa32.91■■■□□ 2.86
Tpm1-216ENSMUST00000113707 KarsQ99MN1 595 aaKnown RBP32.9■■■□□ 2.86
Tpm1-216ENSMUST00000113707 Klhdc4Q921I2 584 aa32.89■■■□□ 2.86
Tpm1-216ENSMUST00000113707 DccP70211 1447 aa32.89■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Nsd3Q6P2L6 1439 aa32.89■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Smc5Q8CG46 1101 aaKnown RBP32.88■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Ahnak2E9PYB0 1738 aaKnown RBP32.88■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Larp1bA0A0A6YXJ7 370 aaKnown RBP32.85■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Ppp1r3fQ9JIG4 799 aa32.85■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Tmco5bQ80X59 307 aa32.84■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Ddx17Q501J6 650 aaKnown RBP32.83■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Aldh1l1Q8R0Y6 902 aa32.83■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Amotl1Q9D4H4 968 aa32.83■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Fam71e1A1L3C1 212 aa32.82■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Maco1Q7TQE6 664 aaKnown RBP32.82■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Senp3Q9EP97 568 aaKnown RBP32.82■■■□□ 2.85
Tpm1-216ENSMUST00000113707 Ttll13A4Q9F6 804 aa32.82■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Q3UPC7 1272 aa32.82■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Ggnbp2Q5SV77 696 aa32.82■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Nol11Q8BJW5 723 aaKnown RBP32.82■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Amotl2Q8K371 772 aa32.82■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Adgrb1Q3UHD1 1582 aa32.81■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Gli3Q61602 1583 aa32.81■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Nectin2P32507 530 aa32.8■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Brinp3Q499E0 766 aa32.8■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Rangap1P46061 589 aaKnown RBP32.79■■■□□ 2.84
Tpm1-216ENSMUST00000113707 EspnQ9ET47 871 aa32.79■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Snap23O09044 210 aa32.78■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Nid2O88322 1403 aa32.78■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Prim1P20664 417 aa32.78■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Znf330Q922H9 316 aa32.78■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Nup153E9Q3G8 1462 aaKnown RBP32.76■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Igsf1Q7TQA1 1317 aa32.76■■■□□ 2.84
Tpm1-216ENSMUST00000113707 Chmp5Q9D7S9 219 aa32.76■■■□□ 2.84
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms