RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 PzpQ61838 1495 aa8.79□□□□□ -1
Chm-202ENSMUST00000113388 Ctr9Q62018 1173 aaKnown RBP8.79□□□□□ -1
Chm-202ENSMUST00000113388 Nap1l1P28656 391 aaKnown RBP8.79□□□□□ -1
Chm-202ENSMUST00000113388 GnpatP98192 678 aa8.79□□□□□ -1
Chm-202ENSMUST00000113388 Gtf2e1Q9D0D5 440 aa8.79□□□□□ -1
Chm-202ENSMUST00000113388 Rock1P70335 1354 aa8.79□□□□□ -1
Chm-202ENSMUST00000113388 Arglu1Q3UL36 271 aaKnown RBP8.78□□□□□ -1
Chm-202ENSMUST00000113388 Arhgap4B1AUY3 965 aa8.78□□□□□ -1
Chm-202ENSMUST00000113388 Sin3aQ60520 1274 aaKnown RBP8.78□□□□□ -1
Chm-202ENSMUST00000113388 Dusp9Q7TNL7 452 aa8.78□□□□□ -1
Chm-202ENSMUST00000113388 Tulp4Q9JIL5 1547 aa8.78□□□□□ -1
Chm-202ENSMUST00000113388 Q3UJC8 639 aa8.78□□□□□ -1
Chm-202ENSMUST00000113388 Ice2Q3UZ18 988 aaKnown RBP8.78□□□□□ -1
Chm-202ENSMUST00000113388 Gimap5Q8BWF2 308 aa8.78□□□□□ -1
Chm-202ENSMUST00000113388 Abca8aQ8K442 1620 aa8.77□□□□□ -1
Chm-202ENSMUST00000113388 Ggt6Q6PDE7 497 aa8.77□□□□□ -1.01
Chm-202ENSMUST00000113388 Mctp2Q5RJH2 878 aa8.77□□□□□ -1.01
Chm-202ENSMUST00000113388 Srcin1Q9QWI6 1250 aa8.77□□□□□ -1.01
Chm-202ENSMUST00000113388 Ehbp1l1Q99MS7 1716 aa8.77□□□□□ -1.01
Chm-202ENSMUST00000113388 Speer4f2E9Q366 295 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Ccdc173A0JLY1 547 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Ralbp1Q62172 648 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Bank1Q80VH0 783 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Iqca1Q9CUL5 857 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Slc52a2Q9D8F3 450 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 PalldQ9ET54 1408 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Tns3Q5SSZ5 1440 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Fbxo41Q6NS60 873 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Tomm22Q9CPQ3 142 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Iqgap1Q9JKF1 1657 aaKnown RBP8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Cdk13Q69ZA1 1511 aaKnown RBP8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Kif21bQ9QXL1 1668 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Med1Q925J9 1575 aa8.76□□□□□ -1.01
Chm-202ENSMUST00000113388 Ttll13A4Q9F6 804 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Tom1O88746 492 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Exosc9Q9JHI7 438 aaKnown RBP8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Mbd3Q9Z2D8 285 aaKnown RBP8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Nrxn3Q6P9K9 1571 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Brinp3Q499E0 766 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Phlpp1Q8CHE4 1687 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Ppip5k1A2ARP1 1436 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Dapk1Q80YE7 1442 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Wdr78E9PYY5 807 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Casc1Q6TDU8 730 aa8.75□□□□□ -1.01
Chm-202ENSMUST00000113388 Uggt1Q6P5E4 1551 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Mcm4P49717 862 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Rassf4Q8CB96 322 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Adamts13Q769J6 1426 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Arhgef28P97433 1693 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Cdkn1cP49919 348 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Slc7a3P70423 618 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Hdgfl1Q2VPR5 283 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Dnajc14Q921R4 703 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Gabpb2P81069 414 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 SarnpQ9D1J3 210 aaKnown RBP8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Lrrc7Q80TE7 1490 aa8.74□□□□□ -1.01
Chm-202ENSMUST00000113388 Rabep1O35551 862 aa8.73□□□□□ -1.01
Chm-202ENSMUST00000113388 Letm1Q9Z2I0 738 aa8.73□□□□□ -1.01
Chm-202ENSMUST00000113388 Eif2ak4Q9QZ05 1648 aa8.73□□□□□ -1.01
Chm-202ENSMUST00000113388 Gli3Q61602 1583 aa8.73□□□□□ -1.01
Chm-202ENSMUST00000113388 Prdm2A2A7B5 1709 aaKnown RBP8.73□□□□□ -1.01
Chm-202ENSMUST00000113388 Tspyl2Q7TQI8 677 aa8.73□□□□□ -1.01
Chm-202ENSMUST00000113388 Pus7B7ZNL8 666 aaKnown RBP8.73□□□□□ -1.01
Chm-202ENSMUST00000113388 Wwc2Q6NXJ0 1187 aa8.73□□□□□ -1.01
Chm-202ENSMUST00000113388 Brpf1B2RRD7 1212 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 Def6Q8C2K1 630 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 E2f4Q8R0K9 410 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 PplQ9R269 1755 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 Cdk19Q8BWD8 501 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 Rock2P70336 1388 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 Bms1Q6PGF5 1284 aaKnown RBP8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 Ssh1Q76I79 1042 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 Cep170bQ80U49 1574 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 Ripk4Q9ERK0 786 aa8.72□□□□□ -1.01
Chm-202ENSMUST00000113388 Pwp2Q8BU03 919 aaKnown RBP8.71□□□□□ -1.01
Chm-202ENSMUST00000113388 Acsbg1Q99PU5 721 aa8.71□□□□□ -1.01
Chm-202ENSMUST00000113388 Gemin5Q8BX17 1502 aaKnown RBP8.71□□□□□ -1.02
Chm-202ENSMUST00000113388 MycbpQ9EQS3 103 aa8.71□□□□□ -1.02
Chm-202ENSMUST00000113388 Mug2P28666 1451 aa8.71□□□□□ -1.02
Chm-202ENSMUST00000113388 Rims1Q99NE5 1463 aa8.71□□□□□ -1.02
Chm-202ENSMUST00000113388 Idi1P58044 227 aa8.71□□□□□ -1.02
Chm-202ENSMUST00000113388 OptnQ8K3K8 584 aa8.71□□□□□ -1.02
Chm-202ENSMUST00000113388 Ap3b2Q9JME5 1082 aa8.71□□□□□ -1.02
Chm-202ENSMUST00000113388 Polr3aB2RXC6 1390 aa8.71□□□□□ -1.02
Chm-202ENSMUST00000113388 Qtrt2B8ZXI1 415 aa8.7□□□□□ -1.02
Chm-202ENSMUST00000113388 Kcnh8P59111 1102 aa8.7□□□□□ -1.02
Chm-202ENSMUST00000113388 Ccar1Q8CH18 1146 aaKnown RBP8.7□□□□□ -1.02
Chm-202ENSMUST00000113388 Plagl1Q9JLQ4 704 aa8.7□□□□□ -1.02
Chm-202ENSMUST00000113388 Zc3h13E9Q784 1729 aaKnown RBP8.7□□□□□ -1.02
Chm-202ENSMUST00000113388 Rsph3aQ3UFY4 516 aa8.7□□□□□ -1.02
Chm-202ENSMUST00000113388 Slit3Q9WVB4 1523 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Ciz1Q8VEH2 845 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Il4rP16382 810 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Ccdc38Q8CDN8 563 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Nol7Q9D7Z3 254 aaKnown RBP8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Dnai2A2AC93 623 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Zfp251Q6PCX8 632 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Smim5Q8BT42 78 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Slc5a4bQ91ZP4 660 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 RalgapbQ8BQZ4 1484 aa8.69□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms