RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Usp26Q99MX1 835 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Map3k14Q9WUL6 942 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Arih1Q9Z1K5 555 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Ncoa3O09000 1398 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Slc10a4Q3UEZ8 437 aa10.59□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Tigd5Q499M4 642 aa10.59□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Scnn1aQ61180 699 aa10.59□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Tfip11Q9ERA6 838 aaKnown RBP10.59□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Lemd3Q9WU40 921 aa10.59□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 UvssaQ9D479 717 aa10.58□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Bcl9Q9D219 1425 aa10.58□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 AU022751B1B0V2 589 aa10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Mdm2P23804 489 aa10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Ptk2P34152 1090 aa10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Atp6v1aP50516 617 aaKnown RBP10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 5730596B20RikQ8BQ08 205 aa10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Plcg2Q8CIH5 1265 aa10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Plpp7Q91WB2 271 aa10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Tmub1Q9JMG3 245 aa10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Rimbp3Q3V0F0 1606 aa10.57□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 RictorQ6QI06 1708 aa10.56□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Hmx2P43687 273 aa10.56□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Setdb1O88974 1307 aa10.56□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Gm32742A0A1B0GT42 1604 aa10.55□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Trpm2Q91YD4 1506 aa10.55□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Scube2Q9JJS0 997 aa10.55□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Cdc42bpgQ80UW5 1551 aa10.55□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Pdcd11Q6NS46 1862 aaKnown RBP10.55□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Mug1P28665 1476 aa10.55□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Knl1Q66JQ7 1612 aa10.55□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Lmo7E9PYF4 1699 aaKnown RBP10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Emp3O35912 163 aa10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Supt5hO55201 1082 aaKnown RBP10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Slc30a10Q3UVU3 470 aa10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Aebp1Q640N1 1128 aa10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Cep162Q6ZQ06 1403 aa10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 4930504O13RikQ8C5Z9 145 aa10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Mmp16Q9WTR0 607 aa10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Nr1h3Q9Z0Y9 445 aa10.54□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 CltcQ68FD5 1675 aaKnown RBP10.53□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Abcc3B2RX12 1523 aa10.53□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 SowahcQ8C0J6 512 aa10.53□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Gm17324Q8C6J8 137 aa10.53□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Ppp2r2dQ925E7 453 aa10.53□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 AlkP97793 1621 aa10.53□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 Kdm3bQ6ZPY7 1562 aa10.52□□□□□ -0.72
Ccdc47-202ENSMUST00000106865 PtprnQ60673 979 aa10.52□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Nr6a1Q64249 495 aa10.52□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Arhgap23Q69ZH9 1483 aa10.52□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Zc3h13E9Q784 1729 aaKnown RBP10.52□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Dhx57Q6P5D3 1388 aaKnown RBP10.52□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Afap1Q80YS6 731 aa10.51□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 MypopQ8R4U1 393 aa10.51□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Peg3Q3URU2 1571 aa10.51□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Trappc8E9PWG2 1437 aa10.5□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Cfap74Q3UY96 1578 aa10.5□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.5□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Hoxb4P10284 250 aa10.49□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Cabp4Q8VHC5 271 aa10.49□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Rims2Q9EQZ7 1530 aa10.48□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Cdc42bpbQ7TT50 1713 aa10.48□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Ube3bQ9ES34 1070 aa10.48□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 PzpQ61838 1495 aa10.48□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Pcf11G3X9Z4 1553 aa10.48□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Fhod3Q76LL6 1578 aa10.48□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 FkbplO35450 347 aa10.46□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Hoxb3P09026 433 aa10.46□□□□□ -0.73
Ccdc47-202ENSMUST00000106865 Spata31d1aE9QA35 1336 aa10.45□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Pkd2O35245 966 aa10.45□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Nrg2P56974 756 aa10.45□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Ctdspl2Q8BG15 465 aa10.45□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Tubgcp6G5E8P0 1769 aa10.44□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Scaf11E9PZM7 1456 aaKnown RBP10.44□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Cul4bA2A432 970 aaKnown RBP10.44□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Ccr5P51682 354 aa10.44□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Lmod2Q3UHZ5 550 aa10.44□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Gli2Q0VGT2 1544 aa10.43□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Med14A2ABV5 1459 aaKnown RBP10.43□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Abl2Q4JIM5 1182 aa10.43□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Rint1Q8BZ36 792 aa10.43□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 DnmbpQ6TXD4 1580 aa10.43□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Fcf1Q9CTH6 198 aa10.42□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Ufsp1Q9CZP0 217 aa10.42□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Tmem52Q9D702 196 aa10.42□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Slit2Q9R1B9 1521 aa10.42□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Naip6Q9JIB6 1403 aa10.41□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Vars2Q3U2A8 1060 aa10.41□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Phf12Q5SPL2 1003 aa10.41□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Ppp1r3fQ9JIG4 799 aa10.41□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Xrn1P97789 1719 aaKnown RBP10.41□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Wfs1P56695 890 aa10.4□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Pacs2Q3V3Q7 862 aa10.4□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Brd2Q7JJ13 798 aaKnown RBP10.4□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 SpidrQ8BGX7 933 aa10.4□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Pcdhb22Q91XZ8 794 aa10.4□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Mtmr1Q9Z2C4 669 aa10.4□□□□□ -0.74
Ccdc47-202ENSMUST00000106865 Tiam1Q60610 1591 aa10.39□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 NexmifQ5DTT1 1515 aa10.39□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Rapgef3Q8VCC8 918 aa10.39□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Sp7Q8VI67 428 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms