RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 OptnQ8K3K8 584 aa19.2■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Col15a1O35206 1367 aa19.19■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Slc4a1apE9PX68 744 aa19.19■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Prdm10Q3UTQ7 1184 aa19.19■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Sin3aQ60520 1274 aaKnown RBP19.19■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Vps33bP59016 617 aa19.18■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Apba2P98084 750 aa19.18■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Ezh2Q61188 746 aaKnown RBP19.17■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 GalcP54818 684 aa19.16■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Rpgrip1Q9EPQ2 1331 aa19.16■□□□□ 0.66
Ccdc58-201ENSMUST00000099937 Hoxc9P09633 260 aa19.14■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Sik1Q60670 779 aa19.13■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Pnpla7A2AJ88 1352 aa19.13■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Ptpn23Q6PB44 1692 aa19.12■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Ddb1Q3U1J4 1140 aaKnown RBP19.12■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Bsdc1Q80Y55 427 aa19.12■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Mst1rQ62190 1378 aa19.11■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Ppfibp2O35711 882 aa19.11■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Pak3Q61036 559 aa19.11■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Zcrb1Q9CZ96 217 aaKnown RBP19.11■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Snapc4Q8BP86 1333 aa19.1■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Vars2Q3U2A8 1060 aa19.1■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Rab3gap2Q8BMG7 1366 aa19.09■□□□□ 0.65
Ccdc58-201ENSMUST00000099937 Kcnh4A2A5F7 1018 aa19.08■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Fam184bQ0KK56 942 aa19.08■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 PrxO55103 1391 aa19.07■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Scaf1Q5U4C3 1256 aaKnown RBP19.07■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Ginm1Q91WR6 327 aa19.06■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Birc3O08863 600 aa19.05■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Zpr1Q62384 459 aa19.05■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Zranb3Q6NZP1 1069 aa19.05■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Arfgef2A2A5R2 1792 aa19.05■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Smg6P61406 1418 aaKnown RBP19.05■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Exoc5Q3TPX4 708 aa19.04■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Adgrb1Q3UHD1 1582 aa19.04■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Ccne1Q61457 408 aa19.04■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 PsdQ5DTT2 1024 aa19.03■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Pank3Q8R2W9 370 aa19.03■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Arhgap33Q80YF9 1305 aa19.02■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Slc24a1Q91WD8 1130 aa19.02■□□□□ 0.64
Ccdc58-201ENSMUST00000099937 Plekhd1B2RPU2 505 aa19■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Ppp1r37Q8BKR5 712 aa19■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Cwc22Q8C5N3 908 aaKnown RBP19■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Inpp5dQ9ES52 1191 aa19■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Ahnak2E9PYB0 1738 aaKnown RBP18.98■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Hoxb7P09024 217 aa18.98■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Afg3l2Q8JZQ2 802 aaKnown RBP18.98■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 IbtkQ6ZPR6 1352 aaKnown RBP18.97■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Pim2Q62070 370 aa18.97■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 TkfcQ8VC30 578 aa18.97■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Gm10471E9Q1C7 252 aa18.96■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Fam50bQ9WTJ8 334 aa18.96■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Gprasp1Q5U4C1 1347 aa18.96■□□□□ 0.63
Ccdc58-201ENSMUST00000099937 Dcaf11Q91VU6 549 aa18.95■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Sos2Q02384 1333 aa18.95■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Cc2d1aQ8K1A6 943 aa18.94■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Shank3Q4ACU6 1730 aa18.94■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Eya1P97767 591 aa18.93■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Larp1Q6ZQ58 1072 aaKnown RBP18.92■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Simc1E9Q6E9 1354 aa18.92■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Parp14Q2EMV9 1817 aa18.91■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Tmf1B9EKI3 1091 aa18.91■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Ccdc85cE9Q6B2 420 aa18.91■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Rad17Q6NXW6 688 aa18.91■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Abca3Q8R420 1704 aa18.91■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Eif4a2P10630 407 aa18.9■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Trim28Q62318 834 aa18.9■□□□□ 0.62
Ccdc58-201ENSMUST00000099937 Akt1s1Q9D1F4 257 aa18.89■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 En2P09066 324 aa18.88■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Gm21680A0A0G2JGR8 267 aa18.87■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Fam198bQ3UPI1 517 aa18.87■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Zscan10Q3URR7 782 aa18.87■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Elp1Q7TT37 1333 aaKnown RBP18.87■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 ThemisQ8BGW0 636 aa18.87■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 AtrnQ9WU60 1428 aa18.87■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 P2rx7Q9Z1M0 595 aa18.87■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Kif23E9Q5G3 953 aa18.86■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Gpr150Q8BL07 427 aa18.86■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Nsd3Q6P2L6 1439 aa18.85■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Kcna3P16390 528 aa18.85■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Kdm6aO70546 1401 aa18.84■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Tns2Q8CGB6 1400 aa18.84■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Kiaa0319lQ8K135 1048 aa18.84■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Speer4bQ9D9F7 267 aa18.84■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Rps6ka4Q9Z2B9 773 aa18.84■□□□□ 0.61
Ccdc58-201ENSMUST00000099937 Plekhg5Q66T02 1073 aa18.83■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Rsph6aQ8CDR2 708 aa18.82■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Magea1O89006 320 aa18.81■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Magea5O89009 320 aa18.81■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Emilin1Q99K41 1017 aa18.81■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Magea2Q9R2A2 320 aa18.81■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 PappaQ8R4K8 1624 aa18.8■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 NefmP08553 848 aa18.79■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Q8BT18 775 aa18.79■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Cald1E9QA15 768 aaKnown RBP18.78■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Ankrd13dQ6PD24 605 aa18.78■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 4930572O03RikQ8C5Y0 211 aa18.78■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Nkx2-3P97334 362 aa18.77■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 MpripP97434 1024 aa18.77■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Ubxn2bQ0KL01 331 aa18.77■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms