RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Trpm4Q7TN37 1213 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Mettl16Q9CQG2 553 aaKnown RBP11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Kdm5bQ80Y84 1544 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Map7d2A2AG50 781 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Nfatc2ipO09130 412 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Cyp2c37P56654 490 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Jdp2P97875 163 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Pcgf5Q3UK78 256 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Dhx38Q80X98 1228 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Clasp1Q80TV8 1535 aaKnown RBP11.4□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Thrap3Q569Z6 951 aaKnown RBP11.4□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Swap70Q6A028 585 aaKnown RBP11.4□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Q8C5K5 320 aa11.4□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Spata17Q9D552 379 aa11.4□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Gpr37Q9QY42 600 aa11.4□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Pagr1aQ99L02 253 aa11.4□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Lrrc9Q8CDN9 1456 aa11.39□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Copb2O55029 905 aa11.39□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Psme1P97371 249 aa11.39□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Frmd4aQ8BIE6 1020 aa11.39□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Stk24Q99KH8 431 aa11.39□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Slc52a2Q9D8F3 450 aa11.39□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Rrbp1Q99PL5 1605 aaKnown RBP11.39□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Eif5P59325 429 aaKnown RBP11.38□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Repin1Q5U4E2 545 aa11.38□□□□□ -0.59
Upf3b-201ENSMUST00000076265 CrebrfQ8CDG5 640 aaKnown RBP11.38□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Speer4aF8VPX6 267 aa11.38□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Q3UJP5 209 aa11.38□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Map3k20Q9ESL4 802 aaKnown RBP11.38□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Arhgap31A6X8Z5 1425 aa11.38□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Znf608Q56A10 1511 aa11.38□□□□□ -0.59
Upf3b-201ENSMUST00000076265 1700020D05RikQ99PB1 294 aa11.37□□□□□ -0.59
Upf3b-201ENSMUST00000076265 InhbeO08717 350 aa11.37□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Zbtb12Q9Z150 459 aa11.37□□□□□ -0.59
Upf3b-201ENSMUST00000076265 DgkiD3YWQ0 1071 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 PrlrQ08501 608 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Sde2Q8K1J5 448 aaKnown RBP11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Gripap1Q8VD04 806 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 ChmQ9QXG2 665 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Homer1Q9Z2Y3 366 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 B020004C17RikJ3QP07 232 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Rfx1P48377 963 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Nub1P54729 614 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Fam160a1Q505K2 1081 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Brinp2Q6DFY8 783 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 ChpfQ6IQX7 774 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Ap3b1Q9Z1T1 1105 aa11.36□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Pick1Q62083 416 aa11.35□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Mrgprb8Q7TN51 330 aa11.35□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Ttc37F8VPK0 1563 aa11.35□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Arhgap4B1AUY3 965 aa11.35□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Txndc2Q6P902 515 aa11.35□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Kbtbd12Q9D618 625 aa11.35□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Kctd17E0CYQ0 296 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 TaglnP37804 201 aaKnown RBP11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Puf60Q3UEB3 564 aaKnown RBP11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Ovgp1Q62010 721 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Cc2d1aQ8K1A6 943 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Atp1b4Q99ME6 356 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Anp32aO35381 247 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Nkx2-3P97334 362 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Iqcf4Q6P8Y2 204 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Ccdc38Q8CDN8 563 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Bcl11bQ99PV8 884 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Erich6bQ9D4S6 220 aa11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 MrrfQ9D6S7 262 aaKnown RBP11.34□□□□□ -0.59
Upf3b-201ENSMUST00000076265 Wdr7Q920I9 1489 aa11.33□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Map2k1P31938 393 aa11.33□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Eva1cP58659 440 aa11.33□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Nutm2Q3V0C3 733 aa11.33□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Mapre1Q61166 268 aaKnown RBP11.33□□□□□ -0.6
Upf3b-201ENSMUST00000076265 LnpkQ7TQ95 425 aa11.33□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Ddx56Q9D0R4 546 aaKnown RBP11.33□□□□□ -0.6
Upf3b-201ENSMUST00000076265 IqceQ6PCQ0 778 aa11.32□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Cuedc1Q8R3V6 388 aa11.32□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Depdc5P61460 1591 aa11.32□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Mapkbp1Q6NS57 1503 aa11.32□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Cfap69Q8BH53 942 aa11.32□□□□□ -0.6
Upf3b-201ENSMUST00000076265 UstQ8BUB6 407 aa11.32□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Gspt1Q8R050 636 aaKnown RBP11.32□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Cog6Q8R3I3 657 aa11.32□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Lsm14aQ8K2F8 462 aaKnown RBP11.31□□□□□ -0.6
Upf3b-201ENSMUST00000076265 NhsB1AV60 1647 aa11.31□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Zfyve16Q80U44 1528 aa11.31□□□□□ -0.6
Upf3b-201ENSMUST00000076265 TrdnE9Q9K5 693 aa11.31□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Cep63Q3UPP8 700 aa11.31□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Ankrd26Q811D2 1581 aa11.31□□□□□ -0.6
Upf3b-201ENSMUST00000076265 ScinQ60604 715 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Ccdc158Q8CDI6 1109 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Plin1Q8CGN5 517 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Ccdc141E9Q8Q6 1531 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Gm11487Q5RIS0 354 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Abcf1Q6P542 837 aaKnown RBP11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Gjc2Q8BQU6 440 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Snapc1Q8K0S9 389 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Rbm43Q99J64 343 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 AdgbG3UZ78 1657 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Atp10dQ8K2X1 1416 aa11.3□□□□□ -0.6
Upf3b-201ENSMUST00000076265 Klhl41A2AUC9 606 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 81.6 ms