RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Gm21698A0A087WQP8 267 aa14.62□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Gm21671G3UY31 267 aa14.62□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Ptpdc1Q6NZK8 747 aa14.62□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Gtf2f1Q3THK3 508 aaKnown RBP14.62□□□□□ -0.07
Ldb3-201ENSMUST00000022327 TnmdQ9EP64 317 aa14.62□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Plcd4Q8K3R3 807 aa14.62□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Cnnm3Q32NY4 713 aa14.61□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Nol8Q3UHX0 1147 aaKnown RBP14.61□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Ehmt1Q5DW34 1296 aa14.61□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Cct4P80315 539 aaKnown RBP14.61□□□□□ -0.07
Ldb3-201ENSMUST00000022327 HnrnpmQ9D0E1 729 aaKnown RBP14.61□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Pip4k2aO70172 405 aa14.61□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Flad1Q8R123 492 aa14.61□□□□□ -0.07
Ldb3-201ENSMUST00000022327 RalgapbQ8BQZ4 1484 aa14.61□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Olfml1Q8BSH2 233 aa14.6□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Kank1E9Q238 1360 aa14.6□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Tspyl2Q7TQI8 677 aa14.6□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Gsdma2Q32M21 443 aa14.59□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Cdc45Q9Z1X9 566 aa14.59□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Cdkl5Q3UTQ8 938 aa14.59□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Pnmal2G3X9N3 661 aa14.59□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Kcnh5Q920E3 988 aa14.59□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.58□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Mum1Q6DID5 682 aa14.58□□□□□ -0.07
Ldb3-201ENSMUST00000022327 Kif20aP97329 887 aa14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Btbd11Q6GQW0 1109 aa14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Plekhm2Q80TQ5 1018 aa14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 GphnQ8BUV3 769 aaKnown RBP14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Erc1Q99MI1 1120 aa14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Exoc6bA6H5Z3 810 aa14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Evi5lH3BKQ3 813 aa14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Washc4Q3UMB9 1173 aa14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Tmco3Q8BH01 678 aa14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 HmmrQ00547 794 aaKnown RBP14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Nup88Q8CEC0 753 aaKnown RBP14.58□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Trim34bJ3QNR8 485 aa14.57□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Slx4Q6P1D7 1565 aa14.57□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Tfip11Q9ERA6 838 aaKnown RBP14.57□□□□□ -0.08
Ldb3-201ENSMUST00000022327 ZgpatQ8VDM1 511 aa14.57□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Ppp4r3bQ922R5 820 aa14.57□□□□□ -0.08
Ldb3-201ENSMUST00000022327 SrrtQ99MR6 875 aaKnown RBP14.57□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Cfap58B2RW38 873 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 ImmtQ8CAQ8 757 aaKnown RBP14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Pmfbp1Q9WVQ0 1022 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Babam1Q3UI43 333 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Krt84Q99M73 603 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Gtf2a1Q99PM3 378 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 OvosQ3UU35 1456 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Abl1P00520 1123 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 TnikP83510 1323 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Nat10Q8K224 1024 aaKnown RBP14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 SelenooQ9DBC0 667 aa14.56□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Gm21663A0A0G2JE01 267 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Gm7361D3Z6R1 267 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 5031410I06RikE9Q4E0 267 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Gm1979E9QAN3 267 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Gm5862K7N5V5 267 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Gm10220K7N660 267 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 AI481877A2ALV5 1481 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Cavin1O54724 392 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Speer4bQ9D9F7 267 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Q3UJC8 639 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Eif3bQ8JZQ9 803 aaKnown RBP14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Rapgef6Q5NCJ1 1609 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Fsd1Q7TPM6 496 aa14.55□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Mctp1E9PV86 951 aa14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Ercc6lQ8BHK9 1240 aa14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Fam193aQ8CGI1 1231 aaKnown RBP14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Gpatch8A2A6A1 1505 aa14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Dnaaf4Q8R368 420 aa14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Cwc15Q9JHS9 229 aaKnown RBP14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Sall3Q62255 1320 aa14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Eif4g1Q6NZJ6 1600 aaKnown RBP14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Irgm2A0A140LIF8 407 aa14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 ImpactO55091 318 aa14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Ddx19aQ61655 478 aaKnown RBP14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Pknox2Q8BG99 474 aa14.54□□□□□ -0.08
Ldb3-201ENSMUST00000022327 TbcaP48428 108 aaKnown RBP14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Phlpp2Q8BXA7 1320 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Dusp9Q7TNL7 452 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Ppm1fQ8CGA0 452 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Tmc1Q8R4P5 757 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Bcl11bQ99PV8 884 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Gm21680A0A0G2JGR8 267 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Prkar2bP31324 416 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Prpf4bQ61136 1007 aaKnown RBP14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 PaskQ8CEE6 1383 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Fancd2Q80V62 1450 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Stim1P70302 685 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Ppp1r9bQ6R891 817 aaKnown RBP14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Phldb2Q8K1N2 1249 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Wasf1Q8R5H6 559 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Trim34aQ99PP6 485 aa14.53□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Anapc15-psA0A140T8L6 141 aa14.52□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Ppm1eQ80TL0 749 aa14.52□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Tango6Q8C3S2 1079 aa14.52□□□□□ -0.08
Ldb3-201ENSMUST00000022327 Atp10dQ8K2X1 1416 aa14.52□□□□□ -0.09
Ldb3-201ENSMUST00000022327 Bag1Q60739 355 aa14.52□□□□□ -0.09
Ldb3-201ENSMUST00000022327 Kiaa0753Q6A000 959 aa14.52□□□□□ -0.09
Ldb3-201ENSMUST00000022327 Fsd2Q8BZ52 692 aa14.52□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms