RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 ZNF487B1APH4 448 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 UPK3BL2E5RIL1 263 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 TRAFD1O14545 582 aaPredicted RBP18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 APOL1O14791 398 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 MATN3O15232 486 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 PJA2O43164 708 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 PSTPIP1O43586 416 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 SH3BP5O60239 455 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 KRT10P13645 584 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 CSRP1P21291 193 aaKnown RBP18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 XPAP23025 273 aaPredicted RBP18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 CCNCP24863 283 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 CDKN2BP42772 138 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 NAP1L1P55209 391 aaKnown RBP18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 AP1S1P61966 158 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 DYNLT1P63172 113 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 ODF2Q5BJF6 829 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 SLC45A4Q5BKX6 768 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 CFAP58Q5T655 872 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 KDM7AQ6ZMT4 941 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 GCNT7Q6ZNI0 430 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 VSIG1Q86XK7 387 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 HCAR2Q8TDS4 363 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 MAML1Q92585 1016 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 SKA1Q96BD8 255 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 ECHDC3Q96DC8 303 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 NUDCD1Q96RS6 583 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 LGMNQ99538 433 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 C1QTNF2Q9BXJ5 285 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 PCDH12Q9NPG4 1184 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 SCUBE2Q9NQ36 999 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 TRIM10Q9UDY6 481 aa18.83■□□□□ 0.6
PPP4R1-215ENST00000580182 BTNL10A8MVZ5 291 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 AKT2P31751 481 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 HSPA9P38646 679 aaKnown RBP18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 ADCY2Q08462 1091 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 SLC14A1Q13336 389 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 HNRNPDQ14103 355 aaKnown RBP18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 SHBQ15464 509 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 TMEM52BQ4KMG9 183 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 BRAT1Q6PJG6 821 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 B4GALNT4Q76KP1 1039 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 KIAA1328Q86T90 577 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 BBS5Q8N3I7 341 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 CCNYQ8ND76 341 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 CXorf40AQ8TE69 158 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 BMFQ96LC9 184 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 TSGA13Q96PP4 275 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 KLF6Q99612 283 aaPredicted RBP18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 CAAP1Q9H8G2 361 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 COQ6Q9Y2Z9 468 aa18.82■□□□□ 0.6
PPP4R1-215ENST00000580182 POM121BA6NF01 834 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 RIOK3O14730 519 aaKnown RBP18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 ZNF883P0CG24 379 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 THEGLP0DJG4 465 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 MX2P20592 715 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 FAM193AP78312 1265 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 ITKQ08881 620 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 TRAF2Q12933 501 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 SGCGQ13326 291 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 IHHQ14623 411 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 TAZQ16635 292 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 N4BP2L1Q5TBK1 243 aaPredicted RBP18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 KAZNQ674X7 775 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 TIGD7Q6NT04 549 aaPredicted RBP18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 SPOCD1Q6ZMY3 1216 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 IQCHQ86VS3 1027 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 CCDC13Q8IYE1 715 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 KATNAL2Q8IYT4 538 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 OR13H1Q8NG92 308 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 HDAC11Q96DB2 347 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 KLHDC7BQ96G42 594 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 ELF4Q99607 663 aaPredicted RBP18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 GDF3Q9NR23 364 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 RBM22Q9NW64 420 aaKnown RBP eCLIP18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 SAE1Q9UBE0 346 aaPredicted RBP18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 ATP8A1Q9Y2Q0 1164 aa18.81■□□□□ 0.6
PPP4R1-215ENST00000580182 CACNA1AO00555 2505 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 A0A1B0GTQ1 180 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 GOLGA6L6A8MZA4 724 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 KCNK1O00180 336 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 HLA-DQB2P05538 268 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 CEACAM1P13688 526 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 CCNB1P14635 433 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 MMP12P39900 470 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 CCT8P50990 548 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 DSC2Q02487 901 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 PPIDQ08752 370 aaKnown RBP18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 ELP6Q0PNE2 266 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 ABI3BPQ7Z7G0 1075 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 NAXDQ8IW45 347 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 SLC22A18ASQ8N1D0 253 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 PAF1Q8N7H5 531 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 PDCD6IPQ8WUM4 868 aaKnown RBP18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 FATE1Q969F0 183 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 ZNF830Q96NB3 372 aaPredicted RBP18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 SEMA3CQ99985 751 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms