RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 PBXIP1Q96AQ6 731 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 HEXIM2Q96MH2 286 aaKnown RBP12.14□□□□□ -0.47
SPIDR-217ENST00000522117 TTYH2Q9BSA4 534 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 ZSCAN5AQ9BUG6 496 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 EPS8L2Q9H6S3 715 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 WASH6PQ9NQA3 447 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 CHST12Q9NRB3 414 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 VPS4AQ9UN37 437 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 PCDHB12Q9Y5F1 795 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 CDY2AQ9Y6F7 541 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 CDY1Q9Y6F8 540 aa12.14□□□□□ -0.47
SPIDR-217ENST00000522117 MN1Q10571 1320 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-217ENST00000522117 FAM149AA5PLN7 773 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 CD4P01730 458 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 PGK2P07205 417 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 CDKN2BP42772 138 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 HTR3AP46098 478 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 NRLP54845 237 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 GTF2IP78347 998 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 MPP1Q00013 466 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 RAD51Q06609 339 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 MAMLD1Q13495 774 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 FAM214AQ32MH5 1076 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 TXNRD3NBQ6F5E7 133 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 ERAP2Q6P179 960 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 GDPD3Q7L5L3 318 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 TCAIMQ8N3R3 496 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 PCDH20Q8N6Y1 951 aaKnown RBP12.13□□□□□ -0.47
SPIDR-217ENST00000522117 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-217ENST00000522117 TTLQ8NG68 377 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 OR10Z1Q8NGY1 313 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 CCDC120Q96HB5 630 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 PAWRQ96IZ0 340 aaKnown RBP12.13□□□□□ -0.47
SPIDR-217ENST00000522117 DACH2Q96NX9 599 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 APBA2Q99767 749 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 MIR1-1HGQ9H1L0 117 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 POPDC2Q9HBU9 364 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 PLIN4Q96Q06 1357 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 PRORSD1PA6NEY8 169 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 ZBTB39O15060 712 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 NDUFA2O43678 99 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 EPN2O95208 641 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 RASAL1O95294 804 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 EGFRP00533 1210 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 MAGP20916 626 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 CBLP22681 906 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 FMO4P31512 558 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 HNF1BP35680 557 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 NDST1P52848 882 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 YWHAZP63104 245 aaKnown RBP12.13□□□□□ -0.47
SPIDR-217ENST00000522117 ADARB1P78563 741 aaKnown RBP12.13□□□□□ -0.47
SPIDR-217ENST00000522117 FPGSQ05932 587 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 ZNF181Q2M3W8 571 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 LDLRAD1Q5T700 205 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 ZNF544Q6NX49 715 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 SLC22A15Q8IZD6 547 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 FAM83FQ8NEG4 500 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-217ENST00000522117 LHFPL5Q8TAF8 219 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 ACTL9Q8TC94 416 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 MUL1Q969V5 352 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 RIOX1Q9H6W3 641 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 EHMT1Q9H9B1 1298 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 LIN7BQ9HAP6 207 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 SIRT5Q9NXA8 310 aa12.13□□□□□ -0.47
SPIDR-217ENST00000522117 SCAF8Q9UPN6 1271 aaKnown RBP12.13□□□□□ -0.47
SPIDR-217ENST00000522117 OR5K4A6NMS3 321 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 A8MV72 311 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-217ENST00000522117 TRDMT1O14717 391 aaKnown RBP12.12□□□□□ -0.47
SPIDR-217ENST00000522117 TBX1O43435 398 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 SLITRK5O94991 958 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 C7P10643 843 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 BMP1P13497 986 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 ADORA2AP29274 412 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 AXLP30530 894 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 CCNA1P78396 465 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 DPYSL3Q14195 570 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 DGUOKQ16854 277 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 ADPRMQ3LIE5 342 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 ESCO2Q56NI9 601 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 C6orf132Q5T0Z8 1188 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 TMEM198Q66K66 360 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 METTL2BQ6P1Q9 378 aaKnown RBP12.12□□□□□ -0.47
SPIDR-217ENST00000522117 ZNF720Q7Z2F6 126 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 SLFN12Q8IYM2 578 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 CNTD1Q8N815 330 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 SLC7A3Q8WY07 619 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 NXPE3Q969Y0 559 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 AGPAT4Q9NRZ5 378 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 TOPORSQ9NS56 1045 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-217ENST00000522117 COL24A1Q17RW2 1714 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 TAF1P21675 1872 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 TRAV6A0A075B6T7 132 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 RNF103-CHMP3A0A140T963 221 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 hCG_1984214I3L0E3 225 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 NEMP1O14524 444 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 FAM13AO94988 1023 aa12.12□□□□□ -0.47
SPIDR-217ENST00000522117 GOT2P00505 430 aaKnown RBP12.12□□□□□ -0.47
SPIDR-217ENST00000522117 HTR1AP08908 422 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms