RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SIGLEC6O43699 453 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 TM7SF2O76062 418 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 CAPNS1P04632 268 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 C1SP09871 688 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 CKMT2P17540 419 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 IGFALSP35858 605 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 ELP6Q0PNE2 266 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 ZNF211Q13398 564 aaPredicted RBP19.1■□□□□ 0.65
COL5A1-203ENST00000460264 TRIM14Q14142 442 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 UGP2Q16851 508 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 TMEM52BQ4KMG9 183 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 ZNF542PQ5EBM4 170 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 TPRG1LQ5T0D9 272 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 TMCO4Q5TGY1 634 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 BRAT1Q6PJG6 821 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 TMCO3Q6UWJ1 677 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 PARGQ86W56 976 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 ZSWIM9Q86XI8 627 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 MARCH9Q86YJ5 346 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 CAMK1DQ8IU85 385 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 OR4C6Q8NH72 309 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 ZNF564Q8TBZ8 553 aaPredicted RBP19.1■□□□□ 0.65
COL5A1-203ENST00000460264 DNAJC7Q99615 494 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 C1QTNF7Q9BXJ2 289 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 TSPY26PQ9H489 355 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 ATP13A3Q9H7F0 1226 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 PCDH12Q9NPG4 1184 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 FAM149AA5PLN7 773 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 FFAR2O15552 330 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 CSF2P04141 144 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 GIMD1P0DJR0 217 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 NME1P15531 152 aaKnown RBP19.09■□□□□ 0.65
COL5A1-203ENST00000460264 SERPINA4P29622 427 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 MMP12P39900 470 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 PDE1CQ14123 709 aaPredicted RBP19.09■□□□□ 0.65
COL5A1-203ENST00000460264 SLC18A3Q16572 532 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 CFAP58Q5T655 872 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 TP53I13Q8NBR0 393 aaPredicted RBP19.09■□□□□ 0.65
COL5A1-203ENST00000460264 ECHDC3Q96DC8 303 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 ZNF599Q96NL3 588 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 PSKH2Q96QS6 385 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 SEPT3Q9UH03 358 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 LRP4O75096 1905 aa19.09■□□□□ 0.65
COL5A1-203ENST00000460264 RIOK3O14730 519 aaKnown RBP19.08■□□□□ 0.64
COL5A1-203ENST00000460264 PEX11BO96011 259 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 CDK4P11802 303 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 SSR1P43307 286 aaKnown RBP19.08■□□□□ 0.64
COL5A1-203ENST00000460264 HNRNPKP61978 463 aaKnown RBP eCLIP19.08■□□□□ 0.64
COL5A1-203ENST00000460264 NSUN2Q08J23 767 aaKnown RBP eCLIP19.08■□□□□ 0.64
COL5A1-203ENST00000460264 SLC10A7Q0GE19 358 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 LBRQ14739 615 aaKnown RBP19.08■□□□□ 0.64
COL5A1-203ENST00000460264 ASTE1Q2TB18 679 aaPredicted RBP19.08■□□□□ 0.64
COL5A1-203ENST00000460264 CPNE8Q86YQ8 564 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 ZNF548Q8NEK5 533 aaPredicted RBP19.08■□□□□ 0.64
COL5A1-203ENST00000460264 OR8K1Q8NGG5 319 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 FAM71BQ8TC56 605 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 PACSIN1Q9BY11 444 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 NLGN3Q9NZ94 848 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 RCOR3Q9P2K3 495 aaPredicted RBP19.08■□□□□ 0.64
COL5A1-203ENST00000460264 ATP8A1Q9Y2Q0 1164 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 COQ6Q9Y2Z9 468 aa19.08■□□□□ 0.64
COL5A1-203ENST00000460264 CFAP47Q6ZTR5 3102 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 KNTC1P50748 2209 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 SRRM3A6NNA2 597 aaPredicted RBP19.07■□□□□ 0.64
COL5A1-203ENST00000460264 PRKCGP05129 697 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 C6P13671 934 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 ACP1P24666 158 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 CDH6P55285 790 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 CLDN6P56747 220 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 AP1S1P61966 158 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 ILKQ13418 452 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 KRT81Q14533 505 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 ZNF235Q14590 738 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 IRF4Q15306 451 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 ERAP2Q6P179 960 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 TMPRSS12Q86WS5 348 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 VSTM4Q8IW00 320 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 ATPAF2Q8N5M1 289 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 RNF214Q8ND24 703 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 CTNNBL1Q8WYA6 563 aaPredicted RBP19.07■□□□□ 0.64
COL5A1-203ENST00000460264 NSMCE3Q96MG7 304 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 MBNL1Q9NR56 388 aaKnown RBP19.07■□□□□ 0.64
COL5A1-203ENST00000460264 CTTNBP2NLQ9P2B4 639 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 UVRAGQ9P2Y5 699 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 KLF15Q9UIH9 416 aa19.07■□□□□ 0.64
COL5A1-203ENST00000460264 DSPP15924 2871 aaKnown RBP19.07■□□□□ 0.64
COL5A1-203ENST00000460264 APC2O95996 2303 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 SSU72P8A0A1W2PR75 194 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 NEMP2A6NFY4 417 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 H3BM21 787 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 SCAMP1O15126 338 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 MAFKO60675 156 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 CD48P09326 243 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 IL4RP24394 825 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 SERPINB6P35237 376 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 LIG3P49916 1009 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 SCNN1BP51168 640 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 RENBPP51606 427 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 ARSEP51690 589 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 THOP1P52888 689 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms