RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 DNAJC8O75937 253 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 HAPLN1P10915 354 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 MAGEA11P43364 429 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 SNRPD1P62314 119 aaKnown RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 WASHC5Q12768 1159 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 CNKSR3Q6P9H4 555 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 ZNF461Q8TAF7 563 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 UCMAQ8WVF2 138 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 CENPIQ92674 756 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 BTBD10Q9BSF8 475 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 OSBPL7Q9BZF2 842 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 IGFLR1Q9H665 355 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 SSU72Q9NP77 194 aaKnown RBP14.14□□□□□ -0.15
SCAF4-202ENST00000399804 MRGBPQ9NV56 204 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 PNPOQ9NVS9 261 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 SUFUQ9UMX1 484 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 RAI2Q9Y5P3 530 aa14.14□□□□□ -0.15
SCAF4-202ENST00000399804 C8AP07357 584 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 IL4RP24394 825 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 ACVRL1P37023 503 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 CYLC2Q14093 348 aaPredicted RBP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 SKIV2LQ15477 1246 aaKnown RBP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 TMPRSS6Q8IU80 811 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 FITM2Q8N6M3 262 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 NCLNQ969V3 563 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 SLC24A3Q9HC58 644 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 COPG2Q9UBF2 871 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 TCRBV5S1A1TA0A578 114 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 UBDO15205 165 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 PLIN3O60664 434 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 POLR2EP19388 210 aaKnown RBP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 IL2P60568 153 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 MPP2Q14168 576 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 AGKQ53H12 422 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 MS4A13Q5J8X5 152 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 RTP2Q5QGT7 225 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 FAM45BPQ6NSW5 357 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 COLGALT2Q8IYK4 626 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 FAM45AQ8TCE6 357 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 ERLEC1Q96DZ1 483 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 ATP13A3Q9H7F0 1226 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 M0QZQ0 153 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 OAZ2O95190 189 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 CYP11A1P05108 521 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 RCN1Q15293 331 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 GALNTL6Q49A17 601 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 TPGS2Q68CL5 300 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 TXNDC8Q6A555 127 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 PAQR9Q6ZVX9 377 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 EFL1Q7Z2Z2 1120 aaKnown RBP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 ALYREFQ86V81 257 aaKnown RBP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 TTC9BQ8N6N2 239 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 NAT16Q8N8M0 369 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 MRPL57Q9BQC6 102 aaKnown RBP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 ABHD14A-ACY1A0A1B0GW23 586 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 DCLK1O15075 740 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 HNRNPLP14866 589 aaKnown RBP eCLIP14.13□□□□□ -0.154e-9■□□□□ 11.3
SCAF4-202ENST00000399804 INSCQ1MX18 579 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 POM121L1PQ3SYA9 428 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 STXBP5Q5T5C0 1151 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 DEFB107AQ8IZN7 70 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 CEP70Q8NHQ1 597 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 PTCD2Q8WV60 388 aaKnown RBP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 NXNL1Q96CM4 212 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 ZNF317Q96PQ6 595 aaPredicted RBP14.13□□□□□ -0.15
SCAF4-202ENST00000399804 TRIM15Q9C019 465 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 ZNF358Q9NW07 568 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 VTI1BQ9UEU0 232 aa14.13□□□□□ -0.15
SCAF4-202ENST00000399804 MEI4A8MW99 385 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 KRT16P08779 473 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 CYP4F8P98187 520 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 IL1RL1Q01638 556 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 ALFQ53S48 1182 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 AFTPHQ6ULP2 937 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 PIGWQ7Z7B1 504 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 PTGR2Q8N8N7 351 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 EVLQ9UI08 416 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 FAM159BA6NKW6 160 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 CLASP2O75122 1294 aaKnown RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 GJA1P17302 382 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 CST5P28325 142 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 PEX19P40855 299 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 PLIN5Q00G26 463 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 BTKQ06187 659 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 PDE1CQ14123 709 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 PRKD1Q15139 912 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 ADGRF1Q5T601 910 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 TSTD2Q5T7W7 516 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 SNX30Q5VWJ9 437 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 PIWIL4Q7Z3Z4 852 aaKnown RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 CACUL1Q86Y37 369 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 KREMEN2Q8NCW0 462 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 STAG3L4Q8TBR4 150 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 SPDL1Q96EA4 605 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 IGSF21Q96ID5 467 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 DNAJC1Q96KC8 554 aaKnown RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 AURKCQ9UQB9 309 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms