RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ACP1P24666 158 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 CSNK1DP48730 415 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 SLC10A7Q0GE19 358 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 ZNF211Q13398 564 aaPredicted RBP17.22■□□□□ 0.35
BRCC3-202ENST00000340647 UGP2Q16851 508 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 ALKBH5Q6P6C2 394 aaKnown RBP17.22■□□□□ 0.35
BRCC3-202ENST00000340647 PGBD5Q8N414 524 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 DENND6BQ8NEG7 585 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 OR4C6Q8NH72 309 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 ECHDC3Q96DC8 303 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 TRIM11Q96F44 468 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 CSPG4P5Q96PW8 444 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.22■□□□□ 0.35
BRCC3-202ENST00000340647 WRAP53Q9BUR4 548 aaKnown RBP17.22■□□□□ 0.35
BRCC3-202ENST00000340647 NUP85Q9BW27 656 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 PACSIN1Q9BY11 444 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 ZWILCHQ9H900 591 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 PCDH18Q9HCL0 1135 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 COQ6Q9Y2Z9 468 aa17.22■□□□□ 0.35
BRCC3-202ENST00000340647 LUC7L2Q9Y383 392 aaKnown RBP17.22■□□□□ 0.35
BRCC3-202ENST00000340647 URB1O60287 2271 aaKnown RBP17.21■□□□□ 0.35
BRCC3-202ENST00000340647 TRABD2BA6NFA1 517 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 TRAFD1O14545 582 aaPredicted RBP17.21■□□□□ 0.35
BRCC3-202ENST00000340647 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
BRCC3-202ENST00000340647 RFPL3O75679 317 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 NEBLO76041 1014 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 CSF2P04141 144 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 NME1P15531 152 aaKnown RBP17.21■□□□□ 0.35
BRCC3-202ENST00000340647 CKMT2P17540 419 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 CR2P20023 1033 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 RABIFP47224 123 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 IL10RBQ08334 325 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 RALGDSQ12967 914 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 ATP13A4Q4VNC1 1196 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 KCTD16Q68DU8 428 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 SRLQ86TD4 932 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 VPS36Q86VN1 386 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 ZSCAN30Q86W11 494 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 FAM174AQ8TBP5 190 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 HCAR2Q8TDS4 363 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 HSPH1Q92598 858 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 PCDH12Q9NPG4 1184 aa17.21■□□□□ 0.35
BRCC3-202ENST00000340647 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.21■□□□□ 0.35
BRCC3-202ENST00000340647 IPO11Q9UI26 975 aaKnown RBP17.21■□□□□ 0.35
BRCC3-202ENST00000340647 KIF26BQ2KJY2 2108 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 DFFAO00273 331 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 FPGTO14772 594 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 FFAR2O15552 330 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 MAFKO60675 156 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 PALMO75781 387 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 C1SP09871 688 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 EIF4A3P38919 411 aaKnown RBP17.2■□□□□ 0.34
BRCC3-202ENST00000340647 MMP12P39900 470 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 RAD51Q06609 339 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 MMRN1Q13201 1228 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 SGCGQ13326 291 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 PDE1CQ14123 709 aaPredicted RBP17.2■□□□□ 0.34
BRCC3-202ENST00000340647 PIGHQ14442 188 aaPredicted RBP17.2■□□□□ 0.34
BRCC3-202ENST00000340647 IHHQ14623 411 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 WSCD2Q2TBF2 565 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 BOLA3Q53S33 107 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 CCDC122Q5T0U0 273 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 DCP2Q8IU60 420 aaKnown RBP17.2■□□□□ 0.34
BRCC3-202ENST00000340647 RBFAQ8N0V3 343 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 GALNT15Q8N3T1 639 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 ZNF548Q8NEK5 533 aaPredicted RBP17.2■□□□□ 0.34
BRCC3-202ENST00000340647 TEKT4Q8WW24 435 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 ZNF641Q96N77 438 aaPredicted RBP17.2■□□□□ 0.34
BRCC3-202ENST00000340647 PSKH2Q96QS6 385 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 DNAJC28Q9NX36 388 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 ANAPC7Q9UJX3 599 aa17.2■□□□□ 0.34
BRCC3-202ENST00000340647 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 K7ESM1 405 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 NEMP1O14524 444 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 SCAMP1O15126 338 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 CASC3O15234 703 aaKnown RBP17.19■□□□□ 0.34
BRCC3-202ENST00000340647 DAPK3O43293 454 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 GCATO75600 419 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 TM7SF2O76062 418 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 ZNF135P52742 658 aaPredicted RBP17.19■□□□□ 0.34
BRCC3-202ENST00000340647 TAS2R40P59535 323 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 TPM4P67936 248 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 INSM1Q01101 510 aaPredicted RBP17.19■□□□□ 0.34
BRCC3-202ENST00000340647 NSUN2Q08J23 767 aaKnown RBP eCLIP17.19■□□□□ 0.34
BRCC3-202ENST00000340647 AGERQ15109 404 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 IRF4Q15306 451 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 PARGQ86W56 976 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 TMPRSS12Q86WS5 348 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 RFFLQ8WZ73 363 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 APOLD1Q96LR9 279 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 TUBGCP5Q96RT8 1024 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 DNAJC7Q99615 494 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 DKK4Q9UBT3 224 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 GPSM3Q9Y4H4 160 aa17.19■□□□□ 0.34
BRCC3-202ENST00000340647 ARHGEF17Q96PE2 2063 aaPredicted RBP17.19■□□□□ 0.34
BRCC3-202ENST00000340647 H3BRJ5 948 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 C6P13671 934 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 DESP17661 470 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 HES3Q5TGS1 186 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms