RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 MED26O95402 600 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 FGFR3P22607 806 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 KLRC2P26717 231 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 VSTM1Q6UX27 236 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ZDHHC24Q6UX98 284 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 DSG4Q86SJ6 1040 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 C11orf74Q86VG3 221 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 SPOCK2Q92563 424 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 MTERF3Q96E29 417 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 OSBPL11Q9BXB4 747 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 RIBC2Q9H4K1 309 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ATP13A3Q9H7F0 1226 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 CAB39LQ9H9S4 337 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ARHGEF4Q9NR80 690 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 RAD18Q9NS91 495 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 VPS51Q9UID3 782 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 PSMD13Q9UNM6 376 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 FAM208AQ9UK61 1670 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 DNM1LO00429 736 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 KPNA3O00505 521 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 MAGEC1O60732 1142 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 TCEA3O75764 348 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 TRIP4Q15650 581 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 RBM15BQ8NDT2 890 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 FBXO30Q8TB52 745 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 PPP1R13LQ8WUF5 828 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 TPD52L3Q96J77 140 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 SENP6Q9GZR1 1112 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 CACNA2D2Q9NY47 1150 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 CAB39Q9Y376 341 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 PARNO95453 639 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 KRT75O95678 551 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 SKIV2LQ15477 1246 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 KIAA0408Q6ZU52 694 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 MOB2Q70IA6 237 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 CYP4Z2PQ8N1L4 340 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 SFRP1Q8N474 314 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 SPPL2BQ8TCT7 592 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 KLHL20Q9Y2M5 609 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 SNX8Q9Y5X2 465 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 DHRS12A0PJE2 317 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 PDZK1P1A8MUH7 402 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 TSPAN1O60635 241 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 MMP3P08254 477 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 HDCP19113 662 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 GSTT1P30711 240 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 ABL2P42684 1182 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 LIMK2P53671 638 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 TOP3AQ13472 1001 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 FAM110CQ1W6H9 321 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 CASP12Q6UXS9 341 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 PIGWQ7Z7B1 504 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 ATAD3AQ9NVI7 634 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 SPG21Q9NZD8 308 aa17.19■□□□□ 0.34
TRAPPC11-201ENST00000334690 PNMA8CA0A1B0GUJ8 204 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 CD48P09326 243 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 COX7A2P14406 83 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 BLVRAP53004 296 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 MBTD1Q05BQ5 628 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 CYP2A13Q16696 494 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 INO80DQ53TQ3 878 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 IRGQQ8WZA9 623 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 KCTD15Q96SI1 283 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 SLC9A7Q96T83 725 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 AJAP1Q9UKB5 411 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 QSOX1O00391 747 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 NRP2O60462 931 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 PIRTP0C851 137 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 CYP3A5P20815 502 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 BRCC3P46736 316 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 NETO2Q8NC67 525 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 TCF12Q99081 682 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 CCDC28BQ9BUN5 200 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 KLHL25Q9H0H3 589 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 AGO1Q9UL18 857 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 PLIN3O60664 434 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 TSPAN8P19075 237 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 L1CAMP32004 1257 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 SLC7A2P52569 658 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 CDH13P55290 713 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 SMARCB1Q12824 385 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 EIF2B5Q13144 721 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 ACOX1Q15067 660 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 ATAD3BQ5T9A4 648 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 LYPLAL1Q5VWZ2 237 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 ABRAXAS1Q6UWZ7 409 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 MTSS1LQ765P7 747 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 NIPA2Q8N8Q9 360 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 BTN2A2Q8WVV5 523 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 BTN2A3PQ96KV6 586 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 QRFPRQ96P65 431 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 HNRNPABQ99729 332 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 FZD8Q9H461 694 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 GOLGA2P5Q9HBQ8 144 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 ZNF214Q9UL59 606 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 COMMD3-BMI1R4GMX3 469 aa17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-201ENST00000334690 BBIP1A8MTZ0 92 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms