RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 WASF3Q9UPY6 502 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 MMP20O60882 483 aa27.87■■■□□ 2.05
ATPAF1-201ENST00000329231 TM7SF2O76062 418 aa27.87■■■□□ 2.05
ATPAF1-201ENST00000329231 ITIH2P19823 946 aa27.87■■■□□ 2.05
ATPAF1-201ENST00000329231 PAFAH1B3Q15102 231 aaKnown RBP27.87■■■□□ 2.05
ATPAF1-201ENST00000329231 TMEM52BQ4KMG9 183 aa27.87■■■□□ 2.05
ATPAF1-201ENST00000329231 NCBP2-AS2Q69YL0 99 aa27.87■■■□□ 2.05
ATPAF1-201ENST00000329231 PAF1Q8N7H5 531 aa27.87■■■□□ 2.05
ATPAF1-201ENST00000329231 PCDH12Q9NPG4 1184 aa27.87■■■□□ 2.05
ATPAF1-201ENST00000329231 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 POM121BA6NF01 834 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 TNFSF14O43557 240 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 MFSD11O43934 449 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 RABIFP47224 123 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 BNIP3Q12983 259 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 TCEAL1Q15170 157 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 MARC1Q5VT66 337 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 CCDC170Q8IYT3 715 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 FAF2Q96CS3 445 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 WRAP53Q9BUR4 548 aaKnown RBP27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 FTSJ1Q9UET6 329 aa27.86■■■□□ 2.05
ATPAF1-201ENST00000329231 KDELR1P24390 212 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 SLC1A1P43005 524 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 MAGEA1P43355 309 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 MMP13P45452 471 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 POLR2LP62875 67 aaKnown RBP27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 GALNT2Q10471 571 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 SLC22A18ASQ8N1D0 253 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 ECHDC3Q96DC8 303 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 IFT43Q96FT9 208 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 CNTNAP3BQ96NU0 1288 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 MGME1Q9BQP7 344 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 SCNM1Q9BWG6 230 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 CNTNAP3Q9BZ76 1288 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 GPR27Q9NS67 375 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 ATP8A1Q9Y2Q0 1164 aa27.85■■■□□ 2.05
ATPAF1-201ENST00000329231 RIOK3O14730 519 aaKnown RBP27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 HYAL3O43820 417 aaPredicted RBP27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 TOP3BO95985 862 aaKnown RBP27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 GARSP41250 739 aaKnown RBP27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 SLCO6A1Q86UG4 719 aa27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 ZSWIM9Q86XI8 627 aa27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 ADAMTS14Q8WXS8 1223 aa27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 RAPGEF5Q92565 580 aa27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 CENPTQ96BT3 561 aa27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 NUDCD1Q96RS6 583 aa27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 SCUBE2Q9NQ36 999 aa27.84■■■□□ 2.05
ATPAF1-201ENST00000329231 LRRD1A4D1F6 860 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 TRAFD1O14545 582 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 LCA5LO95447 670 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 ATXN1LP0C7T5 689 aaKnown RBP27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 CR2P20023 1033 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 SPINK2P20155 84 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 CYLC1P35663 651 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 SPA17Q15506 151 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 RALGPS1Q5JS13 557 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 LRRC38Q5VT99 294 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 TIGD7Q6NT04 549 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 RAB44Q7Z6P3 723 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 PGBD5Q8N414 524 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 EID2Q8N6I1 236 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 PNPLA1Q8N8W4 532 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 PANX2Q96RD6 677 aa27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 LUC7LQ9NQ29 371 aaKnown RBP27.83■■■□□ 2.05
ATPAF1-201ENST00000329231 A0A1W2PQ67 120 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 ZNF487B1APH4 448 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 SDC3O75056 442 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 MX2P20592 715 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 MMP12P39900 470 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 IFI16Q16666 785 aaKnown RBP27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 KANSL1Q7Z3B3 1105 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 VSIG1Q86XK7 387 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 CHCHD4Q8N4Q1 142 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 PQLC3Q8N755 202 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 RNF157Q96PX1 679 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 TOR4AQ9NXH8 423 aa27.82■■■□□ 2.04
ATPAF1-201ENST00000329231 SPTY2D1-AS1A0A0U1RR47 76 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 TTC24A2A3L6 582 aaPredicted RBP27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 SOCS5O75159 536 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 LDOC1O95751 146 aaPredicted RBP27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 CCNCP24863 283 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 NOP2P46087 812 aaKnown RBP27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 PFN3P60673 137 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 ODF2Q5BJF6 829 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 RHOT1Q8IXI2 618 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 TEX26Q8N6G2 289 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 SPOCK2Q92563 424 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 CNDP2Q96KP4 475 aaKnown RBP27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 NSMCE3Q96MG7 304 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 TSGA13Q96PP4 275 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 NOD2Q9HC29 1040 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 HAUS2Q9NVX0 235 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 DNAJC28Q9NX36 388 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 NEUROG3Q9Y4Z2 214 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 PCDHA13Q9Y5I0 950 aa27.81■■■□□ 2.04
ATPAF1-201ENST00000329231 CFAP69A5D8W1 941 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 GOLGA8CPA6NN73 597 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 TOR1BO14657 336 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 HTRA2O43464 458 aaPredicted RBP27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 PRKCGP05129 697 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms