RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 PLEKHG6Q3KR16 790 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 GXYLT1Q4G148 440 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 ARL13AQ5H913 290 aaPredicted RBP1.33□□□□□ -2.2
CEP290-208ENST00000604024 NFRKBQ6P4R8 1299 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 OR13A1Q8NGR1 328 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 CDCA5Q96FF9 252 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 PRPF18Q99633 342 aaKnown RBP1.33□□□□□ -2.2
CEP290-208ENST00000604024 OPRPNQ99935 248 aaPredicted RBP1.33□□□□□ -2.2
CEP290-208ENST00000604024 ZFP57Q9NU63 452 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 TMEM30AQ9NV96 361 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 FBXO4Q9UKT5 387 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 CACNA1FO60840 1977 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 CYP4B1P13584 511 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 CTPS1P17812 591 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 EEF1A1P68104 462 aaKnown RBP1.33□□□□□ -2.2
CEP290-208ENST00000604024 CYP4A11Q02928 519 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 DHX34Q14147 1143 aaKnown RBP1.33□□□□□ -2.2
CEP290-208ENST00000604024 MPEG1Q2M385 716 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 SETMARQ53H47 684 aaPredicted RBP1.33□□□□□ -2.2
CEP290-208ENST00000604024 EEF1A1P5Q5VTE0 462 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 HIBCHQ6NVY1 386 aaPredicted RBP1.33□□□□□ -2.2
CEP290-208ENST00000604024 BRSK2Q8IWQ3 736 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 TRIM58Q8NG06 486 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 NEK9Q8TD19 979 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 TMEM19Q96HH6 336 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 GPATCH3Q96I76 525 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 TTC14Q96N46 770 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 SH3GL2Q99962 352 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 MVB12BQ9H7P6 319 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 C17orf75Q9HAS0 396 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 CORO2BQ9UQ03 480 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 CNPY2Q9Y2B0 182 aa1.33□□□□□ -2.2
CEP290-208ENST00000604024 ANKRD62A6NC57 917 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 NR5A2O00482 541 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 NDST3O95803 873 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 HSPA7P48741 367 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 SLC8A3P57103 927 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 IRX1P78414 480 aaPredicted RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 CDK18Q07002 472 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 TBL3Q12788 808 aaKnown RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 ODR4Q5SWX8 454 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 SLC27A1Q6PCB7 646 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 KRBA2Q6ZNG9 492 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 ADAD2Q8NCV1 583 aaKnown RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 TTC8Q8TAM2 541 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 CLEC4CQ8WTT0 213 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 SPATS2LQ9NUQ6 558 aaKnown RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 SLC39A10Q9ULF5 831 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 THRAP3Q9Y2W1 955 aaKnown RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 CEP83Q9Y592 693 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 EID1Q9Y6B2 187 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 TP53BP1Q12888 1972 aaPredicted RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 A0A0A0MQY5 61 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 A0A0G2JPF8 293 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 VSTM5A8MXK1 200 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 HNRNPCL3B7ZW38 293 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 GRM8O00222 908 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 CAPN9O14815 690 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 HNRNPCL1O60812 293 aaKnown RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 IGLV1-44P01699 117 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 HNRNPCL4P0DMR1 293 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 ZNF8P17098 575 aaPredicted RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 PTPN2P17706 415 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 RRM1P23921 792 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 TYK2P29597 1187 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 SEC61BP60468 96 aaKnown RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 SREBF2Q12772 1141 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 RIGQ13278 110 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 RPE65Q16518 533 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 ERC1Q8IUD2 1116 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.32□□□□□ -2.2
CEP290-208ENST00000604024 ZNF441Q8N8Z8 693 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 KLHDC9Q8NEP7 349 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 FGFBP3Q8TAT2 258 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 FAM71BQ8TC56 605 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 TANKQ92844 425 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 SNAPC3Q92966 411 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 ARRDC3Q96B67 414 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 TMEM41AQ96HV5 264 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 ZNF599Q96NL3 588 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 RBM4BQ9BQ04 359 aaKnown RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 WDR13Q9H1Z4 485 aa1.32□□□□□ -2.2
CEP290-208ENST00000604024 DDX43Q9NXZ2 648 aaKnown RBP1.32□□□□□ -2.2
CEP290-208ENST00000604024 A0A1W2PNU3 283 aaPredicted RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 RASA4BC9J798 803 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 PSMD14O00487 310 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 TCERG1O14776 1098 aaKnown RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 SEPT4O43236 478 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 RASA4O43374 803 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 DCXO43602 365 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 FASLGP48023 281 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 TM4SF4P48230 202 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 THOC5Q13769 683 aaKnown RBP1.31□□□□□ -2.2
CEP290-208ENST00000604024 ITGA9Q13797 1035 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 NEDD9Q14511 834 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 LPAL2Q16609 132 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 KCNT1Q5JUK3 1230 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 TTC22Q5TAA0 569 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 KLHDC7AQ5VTJ3 777 aa1.31□□□□□ -2.2
CEP290-208ENST00000604024 SLC26A9Q7LBE3 791 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms