RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, human

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-204	ENST00000554062	SYT2	Q8N9I0	419 aa	Predicted RBP	4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	AVL9	Q8NBF6	648 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	GSDMB	Q8TAX9	411 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	MMAB	Q96EY8	250 aa	Predicted RBP	4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	BBS4	Q96RK4	519 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	HIPK3	Q9H422	1215 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	OSGEPL1	Q9H4B0	414 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	SLC6A13	Q9NSD5	602 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	SEC63	Q9UGP8	760 aa	Known RBP	4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	PPIE	Q9UNP9	301 aa	Known RBP	4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	SOGA1	O94964	1423 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	MST1R	Q04912	1400 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	ADAMTS20	P59510	1910 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062		A0A1W2PQF6	199 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	GRID2IP	A4D2P6	1211 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	CBY3	A6NI87	242 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	FAM157A	C9JC47	383 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	MASP2	O00187	686 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	LIAS	O43766	372 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	OR2C1	O95371	312 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	TUBB4A	P04350	444 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	MYZAP	P0CAP1	466 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	CYP2D6	P10635	497 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	BMP5	P22003	454 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	CTNNA1	P35221	906 aa	Known RBP	4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	PIK3CA	P42336	1068 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	PIP4K2A	P48426	406 aa	Predicted RBP	4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	KRT83	P78385	493 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZBTB16	Q05516	673 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	ACSM2A	Q08AH3	577 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	TCTN1	Q2MV58	587 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	C6orf141	Q5SZD1	244 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	AKNAD1	Q5T1N1	836 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	TBC1D9B	Q66K14	1250 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	ACSM2B	Q68CK6	577 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZNF813	Q6ZN06	617 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	CCDC25	Q86WR0	208 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZNF398	Q8TD17	642 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	RNF183	Q96D59	192 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	REPS1	Q96D71	796 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZNF333	Q96JL9	665 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	HARBI1	Q96MB7	349 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	SIN3A	Q96ST3	1273 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	MACROD1	Q9BQ69	325 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	APOL6	Q9BWW8	343 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	PDE7B	Q9NP56	450 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	OGFR	Q9NZT2	677 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	ABI3	Q9P2A4	366 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	GIMAP2	Q9UG22	337 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	FBXO4	Q9UKT5	387 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	SLC4A4	Q9Y6R1	1079 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	FAM169A	Q9Y6X4	670 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	CLASP1	Q7Z460	1538 aa		4.85	□□□□□ -1.63
PABPN1-204	ENST00000554062	KAT6B	Q8WYB5	2073 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	SYNJ1	O43426	1573 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	TYW5	A2RUC4	315 aa	Known RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	CXorf65	A6NEN9	183 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	RRH	O14718	337 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	TP73	O15350	636 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	SEC14L5	O43304	696 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	QDPR	P09417	244 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	ST6GAL1	P15907	406 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZNF182	P17025	639 aa	Predicted RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	GABRB1	P18505	474 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	STAT2	P52630	851 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	MFAP4	P55083	255 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	F2RL1	P55085	397 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	AIMP1	Q12904	312 aa	Known RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	FOXI1	Q12951	378 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	DRAP1	Q14919	205 aa	Predicted RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	USP41	Q3LFD5	358 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	KIAA1755	Q5JYT7	1200 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	FNDC7	Q5VTL7	733 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	KRT80	Q6KB66	452 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	RPUSD3	Q6P087	351 aa	Known RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	MOB3C	Q70IA8	216 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	TFAP2D	Q7Z6R9	452 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	UBE2Q1	Q7Z7E8	422 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	VSIG1	Q86XK7	387 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	MCU	Q8NE86	351 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	NEU4	Q8WWR8	484 aa	Predicted RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZFYVE19	Q96K21	471 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	FIZ1	Q96SL8	496 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	HEMGN	Q9BXL5	484 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZNF341	Q9BYN7	854 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	OR10A4	Q9H209	315 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	MMRN2	Q9H8L6	949 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	CPNE5	Q9HCH3	593 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	BPIFA1	Q9NP55	256 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	NLK	Q9UBE8	527 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	PACSIN3	Q9UKS6	424 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	MAU2	Q9Y6X3	613 aa		4.84	□□□□□ -1.63
PABPN1-204	ENST00000554062	RUSC2	Q8N2Y8	1516 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms