RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 WNT3AP56704 352 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 ST8SIA6P61647 398 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 AP1S1P61966 158 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 SNRPD1P62314 119 aaKnown RBP13.48□□□□□ -0.25
PRDM2-213ENST00000503842 ENPP2Q13822 863 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 ZNF234Q14588 700 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 FNDC3BQ53EP0 1204 aaKnown RBP13.48□□□□□ -0.25
PRDM2-213ENST00000503842 CARD16Q5EG05 197 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 EGFLAMQ63HQ2 1017 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 TPRG1Q6ZUI0 275 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 Q6ZVU0 165 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 ZNF534Q76KX8 674 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 RNF135Q8IUD6 432 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRDM2-213ENST00000503842 VOPP1Q96AW1 172 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 MRGPRX2Q96LB1 330 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 LRRC40Q9H9A6 602 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 GOLGA6AQ9NYA3 693 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 UBP1Q9NZI7 540 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 NFU1Q9UMS0 254 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 SLC8A2Q9UPR5 921 aa13.48□□□□□ -0.25
PRDM2-213ENST00000503842 WASH3PC4AMC7 463 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 MAN2B1O00754 1011 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 NPC1O15118 1278 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 PMPCBO75439 489 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 ADH1BP00325 375 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 SERPINF2P08697 491 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 IL12RB1P42701 662 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 MAPK8P45983 427 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 GRSF1Q12849 480 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRDM2-213ENST00000503842 CBLBQ13191 982 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 SPARCL1Q14515 664 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 HLTFQ14527 1009 aaKnown RBP eCLIP13.47□□□□□ -0.254e-6■■■■□ 22.5
PRDM2-213ENST00000503842 E2F5Q15329 346 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 HNRNPA1L2Q32P51 320 aaKnown RBP13.47□□□□□ -0.25
PRDM2-213ENST00000503842 ACCSLQ4AC99 568 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 SYCP2LQ5T4T6 812 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 EMC10Q5UCC4 262 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 DPY19L3Q6ZPD9 716 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 GSPT2Q8IYD1 628 aaKnown RBP13.47□□□□□ -0.25
PRDM2-213ENST00000503842 ZCCHC9Q8N567 271 aaKnown RBP13.47□□□□□ -0.25
PRDM2-213ENST00000503842 IPMKQ8NFU5 416 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 OR2A12Q8NGT7 310 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■■■■■ 58.1
PRDM2-213ENST00000503842 FAM3CQ92520 227 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 PTPRN2Q92932 1015 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 ACOX2Q99424 681 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 WNT16Q9UBV4 365 aa13.47□□□□□ -0.25
PRDM2-213ENST00000503842 EVLQ9UI08 416 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-213ENST00000503842 EDDM13A0A1B0GTR0 161 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.46□□□□□ -0.25
PRDM2-213ENST00000503842 LOC285095A0A1B0GVY8 99 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 POP4O95707 220 aaKnown RBP13.46□□□□□ -0.25
PRDM2-213ENST00000503842 HLA-EP13747 358 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 PRKCHP24723 683 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 GRIA1P42261 906 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 MAGEA3P43357 314 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 LMAN1P49257 510 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 CCNHP51946 323 aaPredicted RBP13.46□□□□□ -0.25
PRDM2-213ENST00000503842 PRKCQQ04759 706 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 TRAF2Q12933 501 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 OLIG2Q13516 323 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 MYLK3Q32MK0 819 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 LRRC8BQ6P9F7 803 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 RANBP10Q6VN20 620 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 CAND1Q86VP6 1230 aaKnown RBP13.46□□□□□ -0.25
PRDM2-213ENST00000503842 UBALD2Q8IYN6 164 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 ZNF366Q8N895 744 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 ZNF513Q8N8E2 541 aaPredicted RBP13.46□□□□□ -0.25
PRDM2-213ENST00000503842 CHST14Q8NCH0 376 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 OR6K2Q8NGY2 324 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 FEM1CQ96JP0 617 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 PWWP2AQ96N64 755 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 SERPINB12Q96P63 405 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 TRIB3Q96RU7 358 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 TBL1YQ9BQ87 522 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 FICDQ9BVA6 458 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 FRMD8Q9BZ67 464 aaPredicted RBP13.46□□□□□ -0.25
PRDM2-213ENST00000503842 CPEB1Q9BZB8 566 aaKnown RBP13.46□□□□□ -0.25
PRDM2-213ENST00000503842 MTG2Q9H4K7 406 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 CASS4Q9NQ75 786 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 MTRF1LQ9UGC7 380 aaKnown RBP13.46□□□□□ -0.25
PRDM2-213ENST00000503842 RAI2Q9Y5P3 530 aa13.46□□□□□ -0.25
PRDM2-213ENST00000503842 CKAP5Q14008 2032 aa13.46□□□□□ -0.26
PRDM2-213ENST00000503842 UNC80Q8N2C7 3258 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 ATG2BQ96BY7 2078 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 GOLGA8MH3BSY2 632 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 HTRA2O43464 458 aaPredicted RBP13.45□□□□□ -0.26
PRDM2-213ENST00000503842 PPFIA2O75334 1257 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 PRLP01236 227 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 EPOP01588 193 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 MLNP12872 115 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 GKP32189 559 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 RECQLP46063 649 aaPredicted RBP13.45□□□□□ -0.26
PRDM2-213ENST00000503842 SEC13P55735 322 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 CCINQ13939 588 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 BRD3Q15059 726 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 FBXO43Q4G163 708 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms