RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 ENGASEQ8NFI3 743 aa6.46□□□□□ -1.38
FAM49B-230ENST00000639004 GLIS2Q9BZE0 524 aaPredicted RBP6.46□□□□□ -1.38
FAM49B-230ENST00000639004 MVB12BQ9H7P6 319 aa6.46□□□□□ -1.38
FAM49B-230ENST00000639004 ZBTB40Q9NUA8 1239 aa6.46□□□□□ -1.38
FAM49B-230ENST00000639004 ZNF70Q9UC06 446 aaPredicted RBP6.46□□□□□ -1.38
FAM49B-230ENST00000639004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.46□□□□□ -1.38
FAM49B-230ENST00000639004 TDRD9Q8NDG6 1382 aaKnown RBP6.45□□□□□ -1.38
FAM49B-230ENST00000639004 LY6G6EA0A0G2JKS1 128 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 PGPEP1LA6NFU8 196 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 DDX58O95786 925 aaKnown RBP6.45□□□□□ -1.38
FAM49B-230ENST00000639004 KLKB1P03952 638 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 CHRNB2P17787 502 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 TNFRSF1BP20333 461 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 CHMP24386 653 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 PTGER1P34995 402 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 CPOXP36551 454 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 AVPR1AP37288 418 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 PPP3CCP48454 512 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 CTCFP49711 727 aaPredicted RBP6.45□□□□□ -1.38
FAM49B-230ENST00000639004 EIF3BP55884 814 aaKnown RBP6.45□□□□□ -1.38
FAM49B-230ENST00000639004 CLDN2P57739 230 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 DCTN2Q13561 401 aaKnown RBP6.45□□□□□ -1.38
FAM49B-230ENST00000639004 EPHA10Q5JZY3 1008 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 ATG9BQ674R7 924 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 TXNDC8Q6A555 127 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 HEPHL1Q6MZM0 1159 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 CPLX4Q7Z7G2 160 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 MRPL10Q7Z7H8 261 aaKnown RBP6.45□□□□□ -1.38
FAM49B-230ENST00000639004 ZNF575Q86XF7 245 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 CAMK1DQ8IU85 385 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 KIAA2013Q8IYS2 634 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 CADM4Q8NFZ8 388 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 BICD2Q8TD16 824 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 INPP5DQ92835 1189 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 RNF183Q96D59 192 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 PIP5K1AQ99755 562 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 TMEM79Q9BSE2 394 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 LHPPQ9H008 270 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 RANBP17Q9H2T7 1088 aaKnown RBP6.45□□□□□ -1.38
FAM49B-230ENST00000639004 BRF2Q9HAW0 419 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 FZD3Q9NPG1 666 aa6.45□□□□□ -1.38
FAM49B-230ENST00000639004 SPATS2LQ9NUQ6 558 aaKnown RBP6.45□□□□□ -1.38
FAM49B-230ENST00000639004 MMP3P08254 477 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 ENO3P13929 434 aaPredicted RBP6.44□□□□□ -1.38
FAM49B-230ENST00000639004 ZNF8P17098 575 aaPredicted RBP6.44□□□□□ -1.38
FAM49B-230ENST00000639004 VEPH1Q14D04 833 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 RNPS1Q15287 305 aaKnown RBP6.44□□□□□ -1.38
FAM49B-230ENST00000639004 DUSP6Q16828 381 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 Q5PR19 223 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 MANEAQ5SRI9 462 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 NCAPH2Q6IBW4 605 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 SLC16A12Q6ZSM3 486 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 TRAPPC11Q7Z392 1133 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 SLC46A3Q7Z3Q1 461 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 TBC1D26Q86UD7 250 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 LURAP1LQ8IV03 231 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 NRACQ8N912 160 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 ETNPPLQ8TBG4 499 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 YME1L1Q96TA2 773 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 POLDIP3Q9BY77 421 aaKnown RBP6.44□□□□□ -1.38
FAM49B-230ENST00000639004 NUF2Q9BZD4 464 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 BLOC1S4Q9NUP1 217 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 A4GNTQ9UNA3 340 aa6.44□□□□□ -1.38
FAM49B-230ENST00000639004 TAF4O00268 1085 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 PPEF2O14830 753 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 HSPA1AP0DMV8 641 aaKnown RBP6.43□□□□□ -1.38
FAM49B-230ENST00000639004 HSPA1BP0DMV9 641 aaKnown RBP6.43□□□□□ -1.38
FAM49B-230ENST00000639004 SRD5A1P18405 259 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 DCTDP32321 178 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 POLD2P49005 469 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 CXCR3P49682 368 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 CLCN5P51795 746 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 CDH12P55289 794 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 RUNX2Q13950 521 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 ERV3-1Q14264 604 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 ODF3L2Q3SX64 289 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 PLEKHO1Q53GL0 409 aaPredicted RBP6.43□□□□□ -1.38
FAM49B-230ENST00000639004 C11orf87Q6NUJ2 197 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 PARM1Q6UWI2 310 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 RBFAQ8N0V3 343 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 CHCHD6Q9BRQ6 235 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 ELOVL5Q9NYP7 299 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 PIAS3Q9Y6X2 628 aa6.43□□□□□ -1.38
FAM49B-230ENST00000639004 IGLV5-39A0A0G2JS06 123 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 TYW5A2RUC4 315 aaKnown RBP6.42□□□□□ -1.38
FAM49B-230ENST00000639004 HSPB2A8KAH6 182 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 KLRF2D3W0D1 207 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 MOSPD3O75425 235 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 SEC14L2O76054 403 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 SEC31AO94979 1220 aaKnown RBP6.42□□□□□ -1.38
FAM49B-230ENST00000639004 PSMA4P25789 261 aaKnown RBP6.42□□□□□ -1.38
FAM49B-230ENST00000639004 RASSF2P50749 326 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 EIF5P55010 431 aaKnown RBP6.42□□□□□ -1.38
FAM49B-230ENST00000639004 SELENOVP59797 346 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 RPS3AP61247 264 aaKnown RBP6.42□□□□□ -1.38
FAM49B-230ENST00000639004 RPL7AP62424 266 aaKnown RBP6.42□□□□□ -1.38
FAM49B-230ENST00000639004 CAPSQ13938 189 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 HSPB2Q16082 182 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 SNX30Q5VWJ9 437 aa6.42□□□□□ -1.38
FAM49B-230ENST00000639004 CDC73Q6P1J9 531 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms