RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ERMARDQ5T6L9 678 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 PLEKHA7Q6IQ23 1121 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 LUZP1Q86V48 1076 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 DCP2Q8IU60 420 aaKnown RBP9.42□□□□□ -0.9
NUP50-206ENST00000422489 UMODL1-AS1Q8N2C9 162 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 SLC25A45Q8N413 288 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 TMEM145Q8NBT3 493 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 CXorf40AQ8TE69 158 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 CASKIN2Q8WXE0 1202 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 RAB7BQ96AH8 199 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 ZNF653Q96CK0 615 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 EXOC2Q96KP1 924 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 KCTD15Q96SI1 283 aaPredicted RBP9.42□□□□□ -0.9
NUP50-206ENST00000422489 SYT11Q9BT88 431 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 OSBPL1AQ9BXW6 950 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 EDEM3Q9BZQ6 932 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 TRIM7Q9C029 511 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 SLC39A8Q9C0K1 460 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 CBX8Q9HC52 389 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 UCKL1Q9NWZ5 548 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 DONSONQ9NYP3 566 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 UBA2Q9UBT2 640 aaPredicted RBP9.42□□□□□ -0.9
NUP50-206ENST00000422489 GGT7Q9UJ14 662 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 LAMA1P25391 3075 aa9.42□□□□□ -0.9
NUP50-206ENST00000422489 CNOT1A5YKK6 2376 aaKnown RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 CXorf51AA0A1B0GTR3 108 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 ARHGAP42A6NI28 874 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 TRIM38O00635 465 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 RFPL3O75679 317 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 DKK1O94907 266 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 C1SP09871 688 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 ALPPL2P10696 532 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 GZMAP12544 262 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 MYF5P13349 255 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 ERCC2P18074 760 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 MIPP30301 263 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 PRKCIP41743 596 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 SSR1P43307 286 aaKnown RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 NDST2P52849 883 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 UBASH3AP57075 661 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 ZNF211Q13398 564 aaPredicted RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 PDE1CQ14123 709 aaPredicted RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 SMAD1Q15797 465 aaKnown RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 CFAP58Q5T655 872 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 E4F1Q66K89 784 aaPredicted RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 C19orf48Q6RUI8 117 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 RFX8Q6ZV50 586 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 KANSL1Q7Z3B3 1105 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 ABI3BPQ7Z7G0 1075 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 VPS36Q86VN1 386 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 TMPRSS12Q86WS5 348 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 ARFGAP1Q8N6T3 406 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 FAM174AQ8TBP5 190 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 MS4A3Q96HJ5 214 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 FUCA2Q9BTY2 467 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 WRAP53Q9BUR4 548 aaKnown RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 SNRNP25Q9BV90 132 aaKnown RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 C1QTNF2Q9BXJ5 285 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 MRPL47Q9HD33 250 aaKnown RBP9.41□□□□□ -0.9
NUP50-206ENST00000422489 PCDHGA1Q9Y5H4 931 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
NUP50-206ENST00000422489 ASCC3Q8N3C0 2202 aaKnown RBP9.4□□□□□ -0.9
NUP50-206ENST00000422489 ACACBO00763 2458 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 NEMP2A6NFY4 417 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 PALMO75781 387 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 PIAS2O75928 621 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 TM7SF2O76062 418 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 PIGNO95427 931 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 CDK4P11802 303 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 HTR7P34969 479 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 RABIFP47224 123 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 ACADVLP49748 655 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 THOP1P52888 689 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 SEMG2Q02383 582 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 TARDBPQ13148 414 aaKnown RBP eCLIP9.4□□□□□ -0.9
NUP50-206ENST00000422489 FZD2Q14332 565 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 KLHL40Q2TBA0 621 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 KYAT3Q6YP21 454 aaKnown RBP9.4□□□□□ -0.9
NUP50-206ENST00000422489 KDM7AQ6ZMT4 941 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 SRLQ86TD4 932 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 PROSER1Q86XN7 944 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 PDCD7Q8N8D1 485 aaKnown RBP9.4□□□□□ -0.9
NUP50-206ENST00000422489 LMX1AQ8TE12 382 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 TSC1Q92574 1164 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 HSPH1Q92598 858 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 ARHGEF26Q96DR7 871 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 LENG8Q96PV6 779 aaPredicted RBP9.4□□□□□ -0.9
NUP50-206ENST00000422489 PEBP4Q96S96 227 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 KLF6Q99612 283 aaPredicted RBP9.4□□□□□ -0.9
NUP50-206ENST00000422489 SUV39H2Q9H5I1 410 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 LRRC19Q9H756 370 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 ZWILCHQ9H900 591 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 LHX3Q9UBR4 397 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 MFHAS1Q9Y4C4 1052 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 AK5Q9Y6K8 562 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 CHD8Q9HCK8 2581 aa9.4□□□□□ -0.9
NUP50-206ENST00000422489 NUMA1Q14980 2115 aa9.4□□□□□ -0.91
NUP50-206ENST00000422489 SPTY2D1-AS1A0A0U1RR47 76 aa9.39□□□□□ -0.91
NUP50-206ENST00000422489 EIF3CLB5ME19 914 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms