RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 PROSER1Q86XN7 944 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 C12orf29Q8N999 325 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 GLIS2Q9BZE0 524 aaPredicted RBP19.47■□□□□ 0.71
USP48-201ENST00000308271 COQ10BQ9H8M1 238 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 SMPD3Q9NY59 655 aaPredicted RBP19.47■□□□□ 0.71
USP48-201ENST00000308271 ABI2Q9NYB9 513 aaPredicted RBP19.47■□□□□ 0.71
USP48-201ENST00000308271 DOLKQ9UPQ8 538 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 A0A0J9YYE9 177 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 CTSHP09668 335 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 ITGAXP20702 1163 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 S100A1P23297 94 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 TM4SF1P30408 202 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 RRM2P31350 389 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 EEF1DP3Q658K8 133 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 ABHD15Q6UXT9 468 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 MUC13Q9H3R2 512 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 ABCB10Q9NRK6 738 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 ASLP04424 464 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 C1DQ13901 141 aaKnown RBP19.47■□□□□ 0.71
USP48-201ENST00000308271 CCDC142Q17RM4 750 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 PPP1R26Q5T8A7 1209 aaPredicted RBP19.47■□□□□ 0.71
USP48-201ENST00000308271 POP5Q969H6 163 aaKnown RBP19.47■□□□□ 0.71
USP48-201ENST00000308271 CACNA2D2Q9NY47 1150 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 TMCC3Q9ULS5 477 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 PCDHAC2Q9Y5I4 1007 aa19.47■□□□□ 0.71
USP48-201ENST00000308271 TCRBV7S3A2A0A539 114 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 PURAQ00577 322 aaKnown RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 SPIDRQ14159 915 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 CRY2Q49AN0 593 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 OLFML1Q6UWY5 402 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 ZNF410Q86VK4 478 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 TMEM132CQ8N3T6 1108 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 SPATA6LQ8N4H0 392 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 CMASQ8NFW8 434 aaPredicted RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 UTP15Q8TED0 518 aaKnown RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 SMARCD1Q96GM5 515 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 DEPDC7Q96QD5 511 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 TBCDQ9BTW9 1192 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 NALCNQ8IZF0 1738 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 TAF4O00268 1085 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 TADA2AO75478 443 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 IFNA14P01570 189 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 CERCAMQ5T4B2 595 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 NBPF12Q5TAG4 269 aaPredicted RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 MILR1Q7Z6M3 343 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 KRT73Q86Y46 540 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 MIB1Q86YT6 1006 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 CENPNQ96H22 339 aaPredicted RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 MROH8Q9H579 483 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 WRAP73Q9P2S5 460 aaPredicted RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 SNED1Q8TER0 1413 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 F5H5T6 163 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 MLYCDO95822 493 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 THP07101 528 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 NPR3P17342 541 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 SYTL3Q4VX76 610 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 PSMA8Q8TAA3 256 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 DENND1AQ8TEH3 1009 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 ZHX1-C8orf76Q96EF9 292 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 OSMRQ99650 979 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 NUAK2Q9H093 628 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 ENOPH1Q9UHY7 261 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 C10orf71Q711Q0 1435 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 SNTNA6NMZ2 147 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 FGF10O15520 208 aaPredicted RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 NADKO95544 446 aaPredicted RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 SLC5A3P53794 718 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 RAB14P61106 215 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 NDUFA5Q16718 116 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 FSTL4Q6MZW2 842 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 IL27RAQ6UWB1 636 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 PNPT1Q8TCS8 783 aaKnown RBP19.46■□□□□ 0.71
USP48-201ENST00000308271 FBXL18Q96ME1 805 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 MAGEL2Q9UJ55 1249 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 TBC1D30Q9Y2I9 924 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 COQ6Q9Y2Z9 468 aa19.46■□□□□ 0.71
USP48-201ENST00000308271 YDJCA8MPS7 323 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 CCNT2O60583 730 aaKnown RBP19.45■□□□□ 0.7
USP48-201ENST00000308271 TSPAN8P19075 237 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 RXRGP48443 463 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 NCF4Q15080 339 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 STXBP5Q5T5C0 1151 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 ZNF512Q96ME7 567 aaPredicted RBP19.45■□□□□ 0.7
USP48-201ENST00000308271 DUSP12Q9UNI6 340 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 RGS14O43566 566 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 SEC22BO75396 215 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 IPO13O94829 963 aaKnown RBP19.45■□□□□ 0.7
USP48-201ENST00000308271 ZBTB11O95625 1053 aaPredicted RBP19.45■□□□□ 0.7
USP48-201ENST00000308271 GPIP06744 558 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 POU1F1P28069 291 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 NNMTP40261 264 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 TP53BP2Q13625 1128 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 VEPH1Q14D04 833 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 ADGRG6Q86SQ4 1221 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 SPPL2CQ8IUH8 684 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 GPRC5AQ8NFJ5 357 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 LMO3Q8TAP4 145 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 OTULINQ96BN8 352 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 ADI1Q9BV57 179 aa19.45■□□□□ 0.7
USP48-201ENST00000308271 ADGRE3Q9BY15 652 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms