RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 PCDHA13Q9Y5I0 950 aa16.69■□□□□ 0.26
DNMT1-229ENST00000593049 A0A0A6YYK5 440 aaPredicted RBP16.68■□□□□ 0.26
DNMT1-229ENST00000593049 A0A1W2PPC4 97 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 TMEM110-MUSTN1A8MSY1 372 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 KRIT1O00522 736 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 ARHGAP33O14559 1287 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 IGHV4-34P06331 123 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 GJC1P36383 396 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 NOP2P46087 812 aaKnown RBP16.68■□□□□ 0.26
DNMT1-229ENST00000593049 NEK3P51956 506 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 METAP1P53582 386 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 LRRC38Q5VT99 294 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 LEKR1Q6ZMV7 388 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 PRPF39Q86UA1 669 aaKnown RBP16.68■□□□□ 0.26
DNMT1-229ENST00000593049 ZSCAN30Q86W11 494 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 TRIM69Q86WT6 500 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 VSIG1Q86XK7 387 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 ZCCHC9Q8N567 271 aaKnown RBP16.68■□□□□ 0.26
DNMT1-229ENST00000593049 NPWQ8N729 165 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 C1orf216Q8TAB5 229 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 RAB7BQ96AH8 199 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 ARRDC3Q96B67 414 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 SKA1Q96BD8 255 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 CALN1Q9BXU9 219 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 CPEB1Q9BZB8 566 aaKnown RBP16.68■□□□□ 0.26
DNMT1-229ENST00000593049 RXFP3Q9NSD7 469 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 IPO11Q9UI26 975 aaKnown RBP16.68■□□□□ 0.26
DNMT1-229ENST00000593049 EPN1Q9Y6I3 576 aaPredicted RBP16.68■□□□□ 0.26
DNMT1-229ENST00000593049 DMXL1Q9Y485 3027 aa16.68■□□□□ 0.26
DNMT1-229ENST00000593049 ZNF487B1APH4 448 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 C10orf142B7Z368 130 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 J3KR12 359 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 LATO43561 262 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 PALMO75781 387 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 NDUFA10O95299 355 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 GRIA4P48058 902 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 RENBPP51606 427 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 ARSEP51690 589 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 TAS2R40P59535 323 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 DPYSL3Q14195 570 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 ODF2Q5BJF6 829 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 ZNF805Q5CZA5 627 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 PIP5KL1Q5T9C9 394 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 FBXL19Q6PCT2 694 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 IL27RAQ6UWB1 636 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 BBS5Q8N3I7 341 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 NSMCE1Q8WV22 266 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 DMTF1Q9Y222 760 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 CEP250Q9BV73 2442 aa16.67■□□□□ 0.26
DNMT1-229ENST00000593049 PLK4O00444 970 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 AP1G1O43747 822 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 ADRB3P13945 408 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 IL4RP24394 825 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 CSNK1DP48730 415 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 RACK1P63244 317 aaKnown RBP16.66■□□□□ 0.26
DNMT1-229ENST00000593049 NSUN2Q08J23 767 aaKnown RBP eCLIP16.66■□□□□ 0.26
DNMT1-229ENST00000593049 CYTH1Q15438 398 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 CACNA1EQ15878 2313 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 SLC45A4Q5BKX6 768 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 ANKRD20A8PQ5CZ79 823 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 ATXN7L2Q5T6C5 722 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-229ENST00000593049 GDPD4Q6W3E5 623 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 ADAT2Q7Z6V5 191 aaKnown RBP16.66■□□□□ 0.26
DNMT1-229ENST00000593049 TXLNBQ8N3L3 684 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 HCAR2Q8TDS4 363 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 TUBGCP5Q96RT8 1024 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 BAG1Q99933 345 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-229ENST00000593049 CINPQ9BW66 212 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-229ENST00000593049 TM9SF3Q9HD45 589 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 DDX56Q9NY93 547 aaKnown RBP16.66■□□□□ 0.26
DNMT1-229ENST00000593049 LHX3Q9UBR4 397 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 SEPT3Q9UH03 358 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 SPTBN4Q9H254 2564 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 PCDH15Q96QU1 1955 aa16.66■□□□□ 0.26
DNMT1-229ENST00000593049 SOWAHDA6NJG2 315 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 C4orf47A7E2U8 309 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 CDX4O14627 284 aaPredicted RBP16.65■□□□□ 0.26
DNMT1-229ENST00000593049 SPOPO43791 374 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 CER1O95813 267 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 UGT2B4P06133 528 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 CD48P09326 243 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 HSPA9P38646 679 aaKnown RBP16.65■□□□□ 0.26
DNMT1-229ENST00000593049 MAPK8P45983 427 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 TAS2R38P59533 333 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 MMRN1Q13201 1228 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 PAFAH1B3Q15102 231 aaKnown RBP16.65■□□□□ 0.26
DNMT1-229ENST00000593049 ATP13A4Q4VNC1 1196 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 SETMARQ53H47 684 aaPredicted RBP16.65■□□□□ 0.26
DNMT1-229ENST00000593049 RHOT1Q8IXI2 618 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 OR6K2Q8NGY2 324 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 FAF2Q96CS3 445 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 FEM1CQ96JP0 617 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 GTPBP2Q9BX10 602 aaKnown RBP16.65■□□□□ 0.26
DNMT1-229ENST00000593049 ETNK2Q9NVF9 386 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 HAUS2Q9NVX0 235 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 DKK3Q9UBP4 350 aa16.65■□□□□ 0.26
DNMT1-229ENST00000593049 C16orf96A6NNT2 1141 aa16.64■□□□□ 0.25
DNMT1-229ENST00000593049 OPHN1O60890 802 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms