RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 CCDC117Q8IWD4 279 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 MCUQ8NE86 351 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 SPATA22Q8NHS9 363 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 TTC8Q8TAM2 541 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 KCNV2Q8TDN2 545 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 GRK7Q8WTQ7 553 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 MCMBPQ9BTE3 642 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 C8orf33Q9H7E9 229 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 NOD2Q9HC29 1040 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 C2orf42Q9NWW7 574 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ELOVL2Q9NXB9 296 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 DONSONQ9NYP3 566 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 PAK5Q9P286 719 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 UBA2Q9UBT2 640 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 VPS13AQ96RL7 3174 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 FRYLO94915 3013 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 GOLGA6L10A0A0M3HER8 536 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ESYT3A0FGR9 886 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 H7C0C1 242 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 PPFIA2O75334 1257 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 MT-CYBP00156 380 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 JCHAINP01591 159 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CYBBP04839 570 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 FAM153BP0C7A2 387 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ATP5OP48047 213 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 NUMBP49757 651 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 METAP1P53582 386 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 LMNB2Q03252 620 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 TRAF2Q12933 501 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CAMK2GQ13555 558 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 FAM153CQ494X1 144 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 C4orf22Q6V702 233 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 IGDCC3Q8IVU1 814 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 IL17RCQ8NAC3 791 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 PIH1D2Q8WWB5 315 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CLDN23Q96B33 292 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 EID2BQ96D98 161 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 PWWP2AQ96N64 755 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 TDRD1Q9BXT4 1180 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 FAM153AQ9UHL3 310 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 SORCS3Q9UPU3 1222 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 TECTAO75443 2155 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 PCDH15Q96QU1 1955 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ASLP04424 464 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 DLDP09622 509 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CETN2P41208 172 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 RENBPP51606 427 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ITGA8P53708 1063 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 MAXP61244 160 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 SULT2A1Q06520 285 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 MLF2Q15773 248 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 SLC44A4Q53GD3 710 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 EMC10Q5UCC4 262 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 C8orf74Q6P047 294 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CCNI2Q6ZMN8 369 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CCDC105Q8IYK2 499 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ZCCHC9Q8N567 271 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CHST14Q8NCH0 376 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 USP33Q8TEY7 942 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ANKRD7Q92527 254 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 SNF8Q96H20 258 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 RPL10LQ96L21 214 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 XPO6Q96QU8 1125 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 P2RY13Q9BPV8 354 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 FAM129AQ9BZQ8 928 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 MUC3BQ9H195 1237 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 LRRC4CQ9HCJ2 640 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 WNT16Q9UBV4 365 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 SARDHQ9UL12 918 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 SHOC2Q9UQ13 582 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 PIAS3Q9Y6X2 628 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 COL27A1Q8IZC6 1860 aaPredicted RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 CHURC1-FNTBB4DL54 471 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 SGK1O00141 431 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 MORF4L2Q15014 288 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 PON2Q15165 354 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 TRIP13Q15645 432 aaPredicted RBP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 UAP1Q16222 522 aaPredicted RBP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 ATXN7L2Q5T6C5 722 aaPredicted RBP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 MICALCLQ6ZW33 695 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 PCDH20Q8N6Y1 951 aaKnown RBP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 SIGLEC10Q96LC7 697 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 PARD6BQ9BYG5 372 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 MTG2Q9H4K7 406 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 BRD9Q9H8M2 597 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 RBM22Q9NW64 420 aaKnown RBP eCLIP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 VPS28Q9UK41 221 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 PPM1HQ9ULR3 514 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 ZNF148Q9UQR1 794 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 TEX264Q9Y6I9 313 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 V9GYY5 206 aaPredicted RBP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 MROH6A6NGR9 719 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 CBX4O00257 560 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 TIMM44O43615 452 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 FDFT1P37268 417 aa6.84□□□□□ -1.31
LINC00517-202ENST00000554257 HSPA9P38646 679 aaKnown RBP6.84□□□□□ -1.31
LINC00517-202ENST00000554257 ELF2Q15723 593 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms