RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ZNF354CQ86Y25 554 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 UMODL1-AS1Q8N2C9 162 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DEFB124Q8NES8 71 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OR8K1Q8NGG5 319 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CASKIN2Q8WXE0 1202 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ARRDC3Q96B67 414 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PPP1R16AQ96I34 528 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HDAC8Q9BY41 377 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TRIM7Q9C029 511 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NOL6Q9H6R4 1146 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ARHGAP20Q9P2F6 1191 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HECAQ9UBI9 543 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 AP4E1Q9UPM8 1137 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FCF1Q9Y324 198 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SNX11Q9Y5W9 270 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ACTL7AQ9Y615 435 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SLCO1B1Q9Y6L6 691 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 WASF2Q9Y6W5 498 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KNTC1P50748 2209 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 VILLO15195 856 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LATO43561 262 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DFNA5O60443 496 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RNGTTO60942 597 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LRCH4O75427 683 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GSRP00390 522 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CYP1A2P05177 515 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TPM1P09493 284 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CD38P28907 300 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 EIF4A3P38919 411 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CTSKP43235 329 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CCNHP51946 323 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NDST2P52849 883 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 C21orf59P57076 290 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TAS2R38P59533 333 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TPI1P60174 286 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RAD51Q06609 339 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SERINC3Q13530 473 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TRIM14Q14142 442 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PIGHQ14442 188 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SUZ12Q15022 739 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CA9Q16790 459 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MYLK3Q32MK0 819 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SLC45A4Q5BKX6 768 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PIP5KL1Q5T9C9 394 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LEKR1Q6ZMV7 388 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ERN2Q76MJ5 926 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TRIM69Q86WT6 500 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RYBPQ8N488 228 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HMCESQ96FZ2 354 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LRIG1Q96JA1 1093 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SERAC1Q96JX3 654 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PEBP4Q96S96 227 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KCTD15Q96SI1 283 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SNRNP25Q9BV90 132 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KLC2Q9H0B6 622 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 THAP2Q9H0W7 228 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 IL21RQ9HBE5 538 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PREBQ9HCU5 417 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 AASDHPPTQ9NRN7 309 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TM7SF3Q9NS93 570 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZNHIT6Q9NWK9 470 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GPATCH2LQ9NWQ4 482 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 IP6K2Q9UHH9 426 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DMTF1Q9Y222 760 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PCDHB9Q9Y5E1 797 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PCDHGB2Q9Y5G2 931 aa9.9□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GOLGA4Q13439 2230 aaKnown RBP9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PTPRBP23467 1997 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 A0A1W2PR77 199 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 RCCD1A6NED2 376 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ARHGAP42A6NI28 874 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 MYO1FO00160 1098 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 RNF103O00237 685 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 KCNK3O14649 394 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SH3BP5O60239 455 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ITGB7P26010 798 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 MAT2AP31153 395 aaKnown RBP9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PPP2CBP62714 309 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PPP2CAP67775 309 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 STAT4Q14765 748 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ZNF423Q2M1K9 1284 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SETMARQ53H47 684 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 PPP6R3Q5H9R7 873 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 KCNT1Q5JUK3 1230 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 NAPEPLDQ6IQ20 393 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 FBXL19Q6PCT2 694 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 DBX2Q6ZNG2 339 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 RFX8Q6ZV50 586 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 VSTM4Q8IW00 320 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 MFSD2AQ8NA29 543 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 OR2AP1Q8NGE2 309 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SETD7Q8WTS6 366 aaKnown RBP9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 FEM1CQ96JP0 617 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 SLC6A18Q96N87 628 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 NUP85Q9BW27 656 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 TM6SF2Q9BZW4 377 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 ZDHHC6Q9H6R6 413 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 LRRC19Q9H756 370 aa9.89□□□□□ -0.83
TNFRSF1A-214ENST00000543048 CWC15Q9P013 229 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms