RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ZFYVE26Q68DK2 2539 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 DOCK4Q8N1I0 1966 aa21.39■■□□□ 1.02
VSX1-206ENST00000444511 SIGLEC16A6NMB1 481 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 C16orf96A6NNT2 1141 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 KRIT1O00522 736 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 NEMP1O14524 444 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 FFAR2O15552 330 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 PAK4O96013 591 aaPredicted RBP21.39■■□□□ 1.01
VSX1-206ENST00000444511 GSRP00390 522 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 ACP1P24666 158 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 GKP32189 559 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 SNRPD1P62314 119 aaKnown RBP21.39■■□□□ 1.01
VSX1-206ENST00000444511 SGCGQ13326 291 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 EFHC2Q5JST6 749 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 DNAJC24Q6P3W2 148 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 SCYL2Q6P3W7 929 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 ZSCAN30Q86W11 494 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 DCP2Q8IU60 420 aaKnown RBP21.39■■□□□ 1.01
VSX1-206ENST00000444511 SLC22A18ASQ8N1D0 253 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 OR4C6Q8NH72 309 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 RAB7BQ96AH8 199 aa21.39■■□□□ 1.01
VSX1-206ENST00000444511 DSPP15924 2871 aaKnown RBP21.38■■□□□ 1.01
VSX1-206ENST00000444511 GOLGA6L22H0YM25 854 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 TSPAN6O43657 245 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 PIAS2O75928 621 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 ALPPL2P10696 532 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 EPHB2P29323 1055 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 C1QBPQ07021 282 aaKnown RBP21.38■■□□□ 1.01
VSX1-206ENST00000444511 FGL2Q14314 439 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 ZNF805Q5CZA5 627 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 KYAT3Q6YP21 454 aaKnown RBP21.38■■□□□ 1.01
VSX1-206ENST00000444511 MON1BQ7L1V2 547 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 PDZD3Q86UT5 571 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 IFT43Q96FT9 208 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 BMFQ96LC9 184 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 ERGIC2Q96RQ1 377 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 AGPAT1Q99943 283 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 SCUBE2Q9NQ36 999 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 DNAJC28Q9NX36 388 aa21.38■■□□□ 1.01
VSX1-206ENST00000444511 GOLGA4Q13439 2230 aaKnown RBP21.37■■□□□ 1.01
VSX1-206ENST00000444511 POM121BA6NF01 834 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 ZSCAN5CA6NGD5 496 aaPredicted RBP21.37■■□□□ 1.01
VSX1-206ENST00000444511 LRRC10BA6NIK2 292 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 CCP110O43303 1012 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 BUB1O43683 1085 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 KDELR3O43731 214 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 POP4O95707 220 aaKnown RBP21.37■■□□□ 1.01
VSX1-206ENST00000444511 UGT2B4P06133 528 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 ABL2P42684 1182 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 ZNF143P52747 638 aaPredicted RBP21.37■■□□□ 1.01
VSX1-206ENST00000444511 MYLK3Q32MK0 819 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 ZNF542PQ5EBM4 170 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 PYROXD2Q8N2H3 581 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 MCEEQ96PE7 176 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 OSBPL1AQ9BXW6 950 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 IPO11Q9UI26 975 aaKnown RBP21.37■■□□□ 1.01
VSX1-206ENST00000444511 AK5Q9Y6K8 562 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 APC2O95996 2303 aa21.37■■□□□ 1.01
VSX1-206ENST00000444511 NEMP2A6NFY4 417 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 IGLON5A6NGN9 336 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 FPGTO14772 594 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 RAD51BO15315 384 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 CCDC172P0C7W6 258 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 HOXB3P14651 431 aaPredicted RBP21.36■■□□□ 1.01
VSX1-206ENST00000444511 DESP17661 470 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 RABIFP47224 123 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 HNRNPKP61978 463 aaKnown RBP eCLIP21.36■■□□□ 1.01
VSX1-206ENST00000444511 E2F1Q01094 437 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 ATXN7L2Q5T6C5 722 aaPredicted RBP21.36■■□□□ 1.01
VSX1-206ENST00000444511 TMC6Q7Z403 805 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 RTL3Q8N8U3 475 aaKnown RBP21.36■■□□□ 1.01
VSX1-206ENST00000444511 ARHGEF26Q96DR7 871 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 GDAP1L1Q96MZ0 367 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 KLHL32Q96NJ5 620 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 C1QTNF2Q9BXJ5 285 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 CLCA2Q9UQC9 943 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 ITM2BQ9Y287 266 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 DOCK9Q9BZ29 2069 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 CACNA1GO43497 2377 aa21.36■■□□□ 1.01
VSX1-206ENST00000444511 CREB3O43889 395 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 TMCC1O94876 653 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 FERP16591 822 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 INSM1Q01101 510 aaPredicted RBP21.35■■□□□ 1.01
VSX1-206ENST00000444511 SEMG2Q02383 582 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 RAD51Q06609 339 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 DCUN1D2Q6PH85 259 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 GDPD4Q6W3E5 623 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 CASKIN2Q8WXE0 1202 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 RFFLQ8WZ73 363 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 DCBLD2Q96PD2 775 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 LENG8Q96PV6 779 aaPredicted RBP21.35■■□□□ 1.01
VSX1-206ENST00000444511 EPAS1Q99814 870 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 CNPY3Q9BT09 278 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 NRSN2Q9GZP1 204 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 CAAP1Q9H8G2 361 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 GPR27Q9NS67 375 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 NLGN3Q9NZ94 848 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 GGT7Q9UJ14 662 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 ACACAQ13085 2346 aa21.35■■□□□ 1.01
VSX1-206ENST00000444511 ADAMTS20P59510 1910 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms