RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 A0A0J9YVX5 310 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 TMCC1O94876 653 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 CTSHP09668 335 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 CCDC166P0CW27 439 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 TSHRP16473 764 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 ZFXP17010 805 aaPredicted RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 GABRB3P28472 473 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 SLC5A3P53794 718 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 HPCAP84074 193 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 IL1RL1Q01638 556 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 SOX4Q06945 474 aaPredicted RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 SH3D19Q5HYK7 790 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 OGFRL1Q5TC84 451 aaPredicted RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 DNERQ8NFT8 737 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 SH3RF2Q8TEC5 729 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 PABPC5Q96DU9 382 aaKnown RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 SIKE1Q9BRV8 207 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 MLPHQ9BV36 600 aaPredicted RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 NAA50Q9GZZ1 169 aaKnown RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 CYP3A43Q9HB55 503 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 OR12D3Q9UGF7 316 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 ZCWPW2A0A1B0GU75 182 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 ANKRD33BA6NCL7 494 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 CCDC153Q494R4 210 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 TWF2Q6IBS0 349 aaKnown RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 TMEM110Q86TL2 294 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 KBTBD7Q8WVZ9 684 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 OXSMQ9NWU1 459 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 ARHGAP10A1A4S6 786 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 BAIAP3O94812 1187 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 STMN1P16949 149 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 TPP2P29144 1249 aaPredicted RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 MAGEA3P43357 314 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 SDHAF4Q5VUM1 108 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 LBX2Q6XYB7 198 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 SNX29P2Q8IUI4 249 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 LPPQ93052 612 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 KLHL5Q96PQ7 755 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 EPS8L2Q9H6S3 715 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 UTP6Q9NYH9 597 aaKnown RBP16.94■□□□□ 0.3
SIPA1-201ENST00000394224 USP22Q9UPT9 525 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 WNK3Q9BYP7 1800 aa16.94■□□□□ 0.3
SIPA1-201ENST00000394224 MRASO14807 208 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 UBDO15205 165 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 DDHD2O94830 711 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 PROZP22891 400 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 LRPAP1P30533 357 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 CD68P34810 354 aaPredicted RBP16.93■□□□□ 0.3
SIPA1-201ENST00000394224 MATKP42679 507 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 DUS1LQ6P1R4 473 aaKnown RBP16.93■□□□□ 0.3
SIPA1-201ENST00000394224 PDZD8Q8NEN9 1154 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 DNAJB3Q8WWF6 145 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 FRMD8Q9BZ67 464 aaPredicted RBP16.93■□□□□ 0.3
SIPA1-201ENST00000394224 RRN3Q9NYV6 651 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 RNF11Q9Y3C5 154 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 RAP2CQ9Y3L5 183 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 IGKV6D-21A0A0A0MT36 114 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 H3BMM5 538 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 INPP4BO15327 924 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 KCNH1O95259 989 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 HMBSP08397 361 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 APLP1P51693 650 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 PIGGQ5H8A4 983 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 LIPMQ5VYY2 423 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 OGFOD2Q6N063 350 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 BEST2Q8NFU1 509 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 VPS33AQ96AX1 596 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 DCPSQ96C86 337 aaKnown RBP16.93■□□□□ 0.3
SIPA1-201ENST00000394224 THAP11Q96EK4 314 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 FZD10Q9ULW2 581 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 TTC3P53804 2025 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 A0A0U1RQS6 177 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 CASTOR2A6NHX0 329 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 SOCS2O14508 198 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 PGK1P00558 417 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 RXRBP28702 533 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 NSUN2Q08J23 767 aaKnown RBP eCLIP16.93■□□□□ 0.3
SIPA1-201ENST00000394224 TTLL4Q14679 1199 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 CARTPTQ16568 116 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 MAGEE2Q8TD90 523 aaPredicted RBP16.93■□□□□ 0.3
SIPA1-201ENST00000394224 HAPLN3Q96S86 360 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 WDCPQ9H6R7 721 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 LTB4R2Q9NPC1 389 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 RIMS3Q9UJD0 308 aa16.93■□□□□ 0.3
SIPA1-201ENST00000394224 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 ERI2A8K979 691 aaKnown RBP16.92■□□□□ 0.3
SIPA1-201ENST00000394224 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 NFKBIEO00221 500 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 PSMD12O00232 456 aaPredicted RBP16.92■□□□□ 0.3
SIPA1-201ENST00000394224 SCAMP3O14828 347 aaKnown RBP16.92■□□□□ 0.3
SIPA1-201ENST00000394224 SLC35E2BP0CK96 405 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 TBCELQ5QJ74 424 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 CHST13Q8NET6 341 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 RMND5BQ96G75 393 aaPredicted RBP16.92■□□□□ 0.3
SIPA1-201ENST00000394224 TIMM22Q9Y584 194 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 CDH23Q9H251 3354 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 SMIM31A0A1B0GVY4 71 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 TCAF2A6NFQ2 919 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms