RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 BTBD6Q96KE9 485 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 TM7SF3Q9NS93 570 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 CWC15Q9P013 229 aaKnown RBP28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 UBA2Q9UBT2 640 aaPredicted RBP28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 FNDC3AQ9Y2H6 1198 aaKnown RBP28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 H3BRJ5 948 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 RNGTTO60942 597 aaKnown RBP28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 MFAP3LO75121 409 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 H2AFZP0C0S5 128 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 ARL4AP40617 200 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 CTSKP43235 329 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 RHOAP61586 193 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 HNRNPDQ14103 355 aaKnown RBP28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 SMTNL2Q2TAL5 461 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 ASTE1Q2TB18 679 aaPredicted RBP28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 H2AFVQ71UI9 128 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 ZNF564Q8TBZ8 553 aaPredicted RBP28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 TEKT4Q8WW24 435 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 CTNNBL1Q8WYA6 563 aaPredicted RBP28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 HSPH1Q92598 858 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 OSBPL1AQ9BXW6 950 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 TRIM5Q9C035 493 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 SLC39A8Q9C0K1 460 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 PCDHGB2Q9Y5G2 931 aa28.06■■■□□ 2.08
ATPAF1-201ENST00000329231 AKR1B10O60218 316 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 DFNA5O60443 496 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 PCDH8O95206 1070 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 IGSF6O95976 241 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 ADRB3P13945 408 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 TCF4P15884 667 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 DPYSQ14117 519 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 ZNF805Q5CZA5 627 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 ATXN7L2Q5T6C5 722 aaPredicted RBP28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 AFMIDQ63HM1 303 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 HORMAD1Q86X24 394 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 GAS2L3Q86XJ1 694 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 LZTR1Q8N653 840 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 CTTNBP2NLQ9P2B4 639 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 UVRAGQ9P2Y5 699 aa28.05■■■□□ 2.08
ATPAF1-201ENST00000329231 A0A1W2PQU0 124 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 A0A1W2PR77 199 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 SH3BP5O60239 455 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 PRAMEF11O60813 436 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 WNT1P04628 370 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 RARAP10276 462 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 GKP32189 559 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 PAPOLAP51003 745 aaKnown RBP28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 ADKP55263 362 aaKnown RBP28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 SUZ12Q15022 739 aaKnown RBP28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 CNGA4Q8IV77 575 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 NAXDQ8IW45 347 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 PDFQ9HBH1 243 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 PLXNA2O75051 1894 aa28.04■■■□□ 2.08
ATPAF1-201ENST00000329231 PRAMEF26H0Y7S4 382 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 J3KR12 359 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 WNT9AO14904 365 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 UGT2B4P06133 528 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 SLC25A11Q02978 314 aaKnown RBP28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 STAT4Q14765 748 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 CYTH1Q15438 398 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 HADHQ16836 314 aaKnown RBP28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 ZNF423Q2M1K9 1284 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 PARS2Q7L3T8 475 aaKnown RBP28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 POLNQ7Z5Q5 900 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 MFSD2AQ8NA29 543 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 RAB7BQ96AH8 199 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 CCDC42Q96M95 316 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 ANP32EQ9BTT0 268 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 LCMT1Q9UIC8 334 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 MFHAS1Q9Y4C4 1052 aa28.03■■■□□ 2.08
ATPAF1-201ENST00000329231 KNL1Q8NG31 2342 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 C16orf96A6NNT2 1141 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 H0Y8X5 98 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 TLR4O00206 839 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 DFFAO00273 331 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 AP1G1O43747 822 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 MAGEC1O60732 1142 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 SSR1P43307 286 aaKnown RBP28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 CCT8P50990 548 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 OVGP1Q12889 678 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 GDPD4Q6W3E5 623 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 IQCHQ86VS3 1027 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 ARHGAP12Q8IWW6 846 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 NPWQ8N729 165 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 NETO2Q8NC67 525 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 FEM1CQ96JP0 617 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 PACSIN1Q9BY11 444 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 GDF3Q9NR23 364 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 PCDHB9Q9Y5E1 797 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 FADS3Q9Y5Q0 445 aa28.02■■■□□ 2.08
ATPAF1-201ENST00000329231 AKR1B15C9JRZ8 316 aaPredicted RBP28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 KCNK3O14649 394 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 PMLP29590 882 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 ZNF284Q2VY69 593 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 TXNRD3NBQ6F5E7 133 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 KIAA1161Q6NSJ0 714 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 SETD7Q8WTS6 366 aaKnown RBP28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 KLHL32Q96NJ5 620 aa28.01■■■□□ 2.07
ATPAF1-201ENST00000329231 CAMK1GQ96NX5 476 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms