RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TMCC1O94876 653 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 APRTP07741 180 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 SRPRAP08240 638 aaKnown RBP18.88■□□□□ 0.61
SSBP4-212ENST00000601919 TPSB2P20231 275 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 CD68P34810 354 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-212ENST00000601919 VASPP50552 380 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-212ENST00000601919 GEMP55040 296 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 TPSAB1Q15661 275 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 KCTD19Q17RG1 926 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-212ENST00000601919 RALGPS1Q5JS13 557 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 LINGO4Q6UY18 593 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 TAB3Q8N5C8 712 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-212ENST00000601919 ATP11CQ8NB49 1132 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 TTC8Q8TAM2 541 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 UCMAQ8WVF2 138 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 CPT1BQ92523 772 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 CEP44Q9C0F1 390 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 C8orf33Q9H7E9 229 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-212ENST00000601919 PRKAG3Q9UGI9 489 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 NFU1Q9UMS0 254 aa18.88■□□□□ 0.61
SSBP4-212ENST00000601919 FARP1Q9Y4F1 1045 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-212ENST00000601919 CCDC151A5D8V7 595 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 APODP05090 189 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 OPRD1P41143 372 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 GRIA2P42262 883 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 TNNT3P45378 269 aaPredicted RBP18.87■□□□□ 0.61
SSBP4-212ENST00000601919 SLC6A11P48066 632 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 NUMBP49757 651 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 RHOAP61586 193 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 KDSRQ06136 332 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 NSUN2Q08J23 767 aaKnown RBP eCLIP18.87■□□□□ 0.61
SSBP4-212ENST00000601919 KCNJ11Q14654 390 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 CYTH1Q15438 398 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 TRADDQ15628 312 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 GEN1Q17RS7 908 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 FAXCQ5TGI0 409 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 ALG1LQ6GMV1 187 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 NAT8LQ8N9F0 302 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 TERB1Q8NA31 727 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 FBXO25Q8TCJ0 367 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 ISG20Q96AZ6 181 aaKnown RBP18.87■□□□□ 0.61
SSBP4-212ENST00000601919 IMP4Q96G21 291 aaKnown RBP18.87■□□□□ 0.61
SSBP4-212ENST00000601919 FMO2Q99518 471 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 CIPCQ9C0C6 399 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 VPS45Q9NRW7 570 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 PLA2G4CQ9UP65 541 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 ERVW-1Q9UQF0 538 aa18.87■□□□□ 0.61
SSBP4-212ENST00000601919 COL4A3Q01955 1670 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 TBC1D3BA6NDS4 549 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 LOC730098B7Z3J9 87 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 CD160O95971 181 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 DLDP09622 509 aaKnown RBP18.86■□□□□ 0.61
SSBP4-212ENST00000601919 GLULP15104 373 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 IL9P15248 144 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 MAPK8P45983 427 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 ST8SIA6P61647 398 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 TFF2Q03403 129 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 MPP3Q13368 585 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 TDGQ13569 410 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 SLC14A2Q15849 920 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 ZDHHC24Q6UX98 284 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 RALGPS2Q86X27 583 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-212ENST00000601919 SH2D3CQ8N5H7 860 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 TSEN2Q8NCE0 465 aaKnown RBP18.86■□□□□ 0.61
SSBP4-212ENST00000601919 MCUQ8NE86 351 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 PRCCQ92733 491 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-212ENST00000601919 MSANTD3Q96H12 275 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 ZNF419Q96HQ0 510 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-212ENST00000601919 SEMA3CQ99985 751 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 LRRC40Q9H9A6 602 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 SCUBE2Q9NQ36 999 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 ZDHHC18Q9NUE0 388 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 ELOVL2Q9NXB9 296 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 THEGQ9P2T0 379 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 FAM153AQ9UHL3 310 aa18.86■□□□□ 0.61
SSBP4-212ENST00000601919 MYO10Q9HD67 2058 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 AP3B1O00203 1094 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 TRIM24O15164 1050 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 KAT7O95251 611 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 AP2A1O95782 977 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 IGSF6O95976 241 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 MT-CO1P00395 513 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 SERPINF2P08697 491 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 MAXP61244 160 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 SNRPD1P62314 119 aaKnown RBP18.85■□□□□ 0.61
SSBP4-212ENST00000601919 EMBQ6PCB8 327 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 LINC00523Q86TU6 105 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 ADHFE1Q8IWW8 467 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 PHTF2Q8N3S3 785 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 PGBD5Q8N414 524 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 ZCCHC9Q8N567 271 aaKnown RBP18.85■□□□□ 0.61
SSBP4-212ENST00000601919 PCDH20Q8N6Y1 951 aaKnown RBP18.85■□□□□ 0.61
SSBP4-212ENST00000601919 PDCD7Q8N8D1 485 aaKnown RBP18.85■□□□□ 0.61
SSBP4-212ENST00000601919 KDM1BQ8NB78 822 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 RPL10LQ96L21 214 aaKnown RBP18.85■□□□□ 0.61
SSBP4-212ENST00000601919 NUDCD1Q96RS6 583 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 P2RY13Q9BPV8 354 aa18.85■□□□□ 0.61
SSBP4-212ENST00000601919 XAB2Q9HCS7 855 aaKnown RBP18.85■□□□□ 0.61
SSBP4-212ENST00000601919 FCF1Q9Y324 198 aaKnown RBP18.85■□□□□ 0.61
SSBP4-212ENST00000601919 ACTL7AQ9Y615 435 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms