RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 JUNP05412 331 aaKnown RBP15□□□□□ -0.01
DDX55-209ENST00000542286 MPSTP25325 297 aa15□□□□□ -0.01
DDX55-209ENST00000542286 PCSK1P29120 753 aa15□□□□□ -0.01
DDX55-209ENST00000542286 SEPT6Q14141 434 aa15□□□□□ -0.01
DDX55-209ENST00000542286 SCD5Q86SK9 330 aa15□□□□□ -0.01
DDX55-209ENST00000542286 LCA5Q86VQ0 697 aa15□□□□□ -0.01
DDX55-209ENST00000542286 WDR75Q8IWA0 830 aaKnown RBP15□□□□□ -0.01
DDX55-209ENST00000542286 RSPH1Q8WYR4 309 aa15□□□□□ -0.01
DDX55-209ENST00000542286 OR52B2Q96RD2 323 aa15□□□□□ -0.01
DDX55-209ENST00000542286 SLC9A7Q96T83 725 aa15□□□□□ -0.01
DDX55-209ENST00000542286 MMADHCQ9H3L0 296 aaPredicted RBP15□□□□□ -0.01
DDX55-209ENST00000542286 TASP1Q9H6P5 420 aa15□□□□□ -0.01
DDX55-209ENST00000542286 TAGLN3Q9UI15 199 aa15□□□□□ -0.01
DDX55-209ENST00000542286 ANGPTL2Q9UKU9 493 aa15□□□□□ -0.01
DDX55-209ENST00000542286 TMCO1Q9UM00 188 aa15□□□□□ -0.01
DDX55-209ENST00000542286 SCN10AQ9Y5Y9 1956 aa15□□□□□ -0.01
DDX55-209ENST00000542286 MYLKQ15746 1914 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 A0A1W2PQH9 124 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 SPECC1L-ADORA2AF8WAN1 911 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 IL1BP01584 269 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 ARPP19P56211 112 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 ABCE1P61221 599 aaKnown RBP14.99□□□□□ -0.01
DDX55-209ENST00000542286 DSG1Q02413 1049 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 MGAT3Q09327 533 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 RABGAP1LQ5R372 815 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 RIPOR1Q6ZS17 1223 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 LDB1Q86U70 411 aaPredicted RBP14.99□□□□□ -0.01
DDX55-209ENST00000542286 CIR1Q86X95 450 aaPredicted RBP14.99□□□□□ -0.01
DDX55-209ENST00000542286 ULK2Q8IYT8 1036 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 CSNK1G1Q9HCP0 422 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 PLA2G4CQ9UP65 541 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 ZNF195O14628 629 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 ZBTB14O43829 449 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 DDHD2O94830 711 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 AHSGP02765 367 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 HLA-DQB2P05538 268 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 HMBSP08397 361 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 CNTFP26441 200 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 SPRP35270 261 aaPredicted RBP14.99□□□□□ -0.01
DDX55-209ENST00000542286 USP46P62068 366 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 CNGA3Q16281 694 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 ZNF789Q5FWF6 425 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 GRTP1Q5TC63 336 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 BTBD8Q5XKL5 378 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 FAM171BQ6P995 826 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 PDZD4Q76G19 769 aaPredicted RBP14.99□□□□□ -0.01
DDX55-209ENST00000542286 CEP97Q8IW35 865 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 RBM12BQ8IXT5 1001 aaKnown RBP14.99□□□□□ -0.01
DDX55-209ENST00000542286 ATPAF2Q8N5M1 289 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 DPF3Q92784 378 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 HIC2Q96JB3 615 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 TTC1Q99614 292 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 ECSITQ9BQ95 431 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 CCDC28BQ9BUN5 200 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 COG4Q9H9E3 785 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 NOD1Q9Y239 953 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 PTCH2Q9Y6C5 1203 aa14.99□□□□□ -0.01
DDX55-209ENST00000542286 SF3B1O75533 1304 aaKnown RBP eCLIP14.98□□□□□ -0.013e-6■■■■■ 88.4
DDX55-209ENST00000542286 TMEM233B4DJY2 109 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 HSPA4LO95757 839 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 SBK3P0C264 359 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 CYBAP13498 195 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 ANPEPP15144 967 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 PRKCZQ05513 592 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 CFAP157Q5JU67 520 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 PM20D1Q6GTS8 502 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 CYS1Q717R9 158 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 GATA5Q9BWX5 397 aaPredicted RBP14.98□□□□□ -0.01
DDX55-209ENST00000542286 DNAJB4Q9UDY4 337 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 APOBEC2Q9Y235 224 aaKnown RBP14.98□□□□□ -0.01
DDX55-209ENST00000542286 GIT1Q9Y2X7 761 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 FIS1Q9Y3D6 152 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 NEMP2A6NFY4 417 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 RNASEH1O60930 286 aaKnown RBP14.98□□□□□ -0.01
DDX55-209ENST00000542286 SERPINA6P08185 405 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 MSX2P35548 267 aaPredicted RBP14.98□□□□□ -0.01
DDX55-209ENST00000542286 PBX3P40426 434 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 SERPINB8P50452 374 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 INHBCP55103 352 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 USP10Q14694 798 aaKnown RBP14.98□□□□□ -0.01
DDX55-209ENST00000542286 LRRC36Q1X8D7 754 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 TMEM198Q66K66 360 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 RNF135Q8IUD6 432 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 SCUBE1Q8IWY4 988 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 PPP4R1Q8TF05 950 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 SCYL1Q96KG9 808 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 PKMYT1Q99640 499 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 PCDH10Q9P2E7 1040 aa14.98□□□□□ -0.01
DDX55-209ENST00000542286 TTC36A6NLP5 189 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 GPR182O15218 404 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 IRAK2O43187 625 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 BUD23O43709 281 aaKnown RBP14.97□□□□□ -0.01
DDX55-209ENST00000542286 MAFKO60675 156 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 COQ9O75208 318 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 BAG2O95816 211 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 MX2P20592 715 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 ARNTP27540 789 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 EPHA3P29320 983 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 IHHQ14623 411 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 PPM1LQ5SGD2 360 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms