RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 KRTAP4-12Q9BQ66 201 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 CCDC134Q9H6E4 229 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 PARD6AQ9NPB6 346 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 PPP1R14DQ9NXH3 145 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZNFX1Q9P2E3 1918 aaKnown RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 EIF2B4Q9UI10 523 aaKnown RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZHX1Q9UKY1 873 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 RAB23Q9ULC3 237 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 BARX2Q9UMQ3 279 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 DNAJC16Q9Y2G8 782 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 MRPS17Q9Y2R5 130 aaKnown RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 NOX1Q9Y5S8 564 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 CYP46A1Q9Y6A2 500 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 TANC1Q9C0D5 1861 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 GXYLT2A0PJZ3 443 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CCDC78A2IDD5 438 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 VWA3AA6NCI4 1184 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 A8MVJ9 347 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 TSPAN4O14817 238 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 ANP32CO43423 234 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 STRNO43815 780 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 TIPRLO75663 272 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CNMDO75829 334 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 TMEM225BP0DP42 221 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 HGFP14210 728 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 JUPP14923 745 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 PAFAH1B1P43034 410 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CCR10P46092 362 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 GYG1P46976 350 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 MAN2A2P49641 1150 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 BACE1P56817 501 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 TIRAPP58753 221 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 RNASE9P60153 205 aaKnown RBP5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 HSD11B2P80365 405 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 COASYQ13057 564 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 ITGA7Q13683 1181 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 TOMM20Q15388 145 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CCDC6Q16204 474 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CCNG2Q16589 344 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 LPAL2Q16609 132 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 LIPMQ5VYY2 423 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 DENND2CQ68D51 928 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CDC42EP5Q6NZY7 148 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CXCL17Q6UXB2 119 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CLEC9AQ6UXN8 241 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 SYT13Q7L8C5 426 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 SGMS1Q86VZ5 419 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 MAPKAPK5Q8IW41 473 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 IZUMO1Q8IYV9 350 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM109AQ8N4B1 249 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 NSUN7Q8NE18 718 aaKnown RBP5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 KLHDC9Q8NEP7 349 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 SLC2A12Q8TD20 617 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZNF483Q8TF39 744 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 UBE2Q2Q8WVN8 375 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 KTI12Q96EK9 354 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 RNF125Q96EQ8 232 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 SIN3AQ96ST3 1273 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 MNTQ99583 582 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 CHCHD6Q9BRQ6 235 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 AGXT2Q9BYV1 514 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 LMAN2LQ9H0V9 348 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 SYNPO2LQ9H987 977 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 KRT84Q9NSB2 600 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 MRPS18AQ9NVS2 196 aaKnown RBP5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 HSFX1Q9UBD0 423 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 SLC27A6Q9Y2P4 619 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 GDAQ9Y2T3 454 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 INSL6Q9Y581 213 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 FPGT-TNNI3KV9GXZ4 949 aa5.09□□□□□ -1.59
HMGB1P23-201ENST00000518743 ROBO3Q96MS0 1386 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 TRIP12Q14669 1992 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 PI4KAP2A4QPH2 592 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 NPEPPSL1A6NEC2 478 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 CAPN14A8MX76 684 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 TMCC2O75069 709 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 TULP3O75386 442 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 CER1O95813 267 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 CSF1RP07333 972 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 SUPT20HL2P0C7V6 817 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 ATF7P17544 494 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 ALOX12P18054 663 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 HIBADHP31937 336 aaKnown RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 CTNNB1P35222 781 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 BEX3Q00994 111 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 OCA2Q04671 838 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 CAMK1Q14012 370 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 CSRP2Q16527 193 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 PTCHD3Q3KNS1 767 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 NRN1LQ496H8 165 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 GALNTL6Q49A17 601 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 AASDHQ4L235 1098 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 HS1BP3Q53T59 392 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 NT5DC1Q5TFE4 455 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 DENND1BQ6P3S1 775 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 SPOCD1Q6ZMY3 1216 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 C15orf52Q6ZUT6 534 aaKnown RBP5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 GDF7Q7Z4P5 450 aa5.08□□□□□ -1.6
HMGB1P23-201ENST00000518743 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms