RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 BNC1Q01954 994 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 TSR1Q2NL82 804 aaKnown RBP28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 CASKIN2Q8WXE0 1202 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 HMCESQ96FZ2 354 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 DNAJC7Q99615 494 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 NUP85Q9BW27 656 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 TM6SF2Q9BZW4 377 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 GAREM1Q9H706 876 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 ZNHIT6Q9NWK9 470 aaKnown RBP28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 ANKRD6Q9Y2G4 727 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 WASF2Q9Y6W5 498 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 ASCC3Q8N3C0 2202 aaKnown RBP28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 DAPK3O43293 454 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 LATO43561 262 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 NUDT1P36639 197 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 SNRPD1P62314 119 aaKnown RBP28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 PPP2CBP62714 309 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 PPP2CAP67775 309 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 SERINC3Q13530 473 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 HLA-BQ31612 363 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 PIP5KL1Q5T9C9 394 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 CYP4V2Q6ZWL3 525 aaPredicted RBP28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 PRPF39Q86UA1 669 aaKnown RBP28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 ARRDC3Q96B67 414 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 SKA1Q96BD8 255 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 KCTD15Q96SI1 283 aaPredicted RBP28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 HDAC8Q9BY41 377 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 EBF2Q9HAK2 575 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 PREBQ9HCU5 417 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 IP6K2Q9UHH9 426 aa28.12■■■□□ 2.09
ATPAF1-201ENST00000329231 GSRP00390 522 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 NDST2P52849 883 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 KIF19Q2TAC6 998 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 BOLA3Q53S33 107 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 INO80DQ53TQ3 878 aaPredicted RBP28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 PPP6R3Q5H9R7 873 aaPredicted RBP28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 LEKR1Q6ZMV7 388 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 RFX8Q6ZV50 586 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 ERN2Q76MJ5 926 aaKnown RBP28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 PIP4P1Q86T03 277 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 TRIM69Q86WT6 500 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 RYBPQ8N488 228 aaPredicted RBP28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 DEFB124Q8NES8 71 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 SLC6A18Q96N87 628 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 AASDHPPTQ9NRN7 309 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 ANAPC7Q9UJX3 599 aa28.11■■■□□ 2.09
ATPAF1-201ENST00000329231 ZNF883P0CG24 379 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 CD59P13987 128 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 HCAR3P49019 387 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 C21orf59P57076 290 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 N4BP2L1Q5TBK1 243 aaPredicted RBP28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 NEK5Q6P3R8 708 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 SARM1Q6SZW1 724 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 NIPA2Q8N8Q9 360 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 OR2AP1Q8NGE2 309 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 LRIG1Q96JA1 1093 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 SERAC1Q96JX3 654 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 DEF6Q9H4E7 631 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 ZDHHC6Q9H6R6 413 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 LRRC19Q9H756 370 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 ZWILCHQ9H900 591 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 NENFQ9UMX5 172 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 SNX11Q9Y5W9 270 aa28.1■■■□□ 2.09
ATPAF1-201ENST00000329231 MYO1FO00160 1098 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 GIPC1O14908 333 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 VILLO15195 856 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 TMCC1O94876 653 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 ITGB7P26010 798 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 TAS2R38P59533 333 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 SLC18A3Q16572 532 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 LAYNQ6UX15 382 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 ARHGEF26Q96DR7 871 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 KLC2Q9H0B6 622 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 RBSNQ9H1K0 784 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 DMTF1Q9Y222 760 aa28.09■■■□□ 2.09
ATPAF1-201ENST00000329231 SSU72P8A0A1W2PR75 194 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 ARHGAP42A6NI28 874 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 RNF103O00237 685 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 POP4O95707 220 aaKnown RBP28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 ERCC2P18074 760 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 IL1R2P27930 398 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 CD38P28907 300 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 MAT2AP31153 395 aaKnown RBP28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 NEK3P51956 506 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 MAPK8IP2Q13387 824 aaPredicted RBP28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 SLC45A4Q5BKX6 768 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 NAPEPLDQ6IQ20 393 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 GDAP1L1Q96MZ0 367 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 IL21RQ9HBE5 538 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 ABHD10Q9NUJ1 306 aa28.08■■■□□ 2.09
ATPAF1-201ENST00000329231 NCOR2Q9Y618 2525 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 KRIT1O00522 736 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 RAD51Q06609 339 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 DPYSL2Q16555 572 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 MYLK3Q32MK0 819 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 SETMARQ53H47 684 aaPredicted RBP28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 KCNT1Q5JUK3 1230 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 FBXL19Q6PCT2 694 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 OR6K2Q8NGY2 324 aa28.07■■■□□ 2.08
ATPAF1-201ENST00000329231 CELF6Q96J87 481 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms