RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 POLD3Q15054 466 aaPredicted RBP22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 CA9Q16790 459 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 N4BP2L1Q5TBK1 243 aaPredicted RBP22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 PSAPL1Q6NUJ1 521 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 DPY19L3Q6ZPD9 716 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 PIP4P1Q86T03 277 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 TMIEQ8NEW7 156 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 ARRDC3Q96B67 414 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 TRIM11Q96F44 468 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 EPAS1Q99814 870 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 ZDHHC5Q9C0B5 715 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 CEP44Q9C0F1 390 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 ARHGAP20Q9P2F6 1191 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 AP4E1Q9UPM8 1137 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 FCF1Q9Y324 198 aaKnown RBP22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 SPTBN2O15020 2390 aa22.78■■□□□ 1.24
GTF2F1-204ENST00000594965 UPK3BL1B0FP48 263 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 UPK3BL2E5RIL1 263 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 SLC7A4O43246 635 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 CD59P13987 128 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 NOVA1P51513 510 aaKnown RBP22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 CCR5P51681 352 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 AFF3P51826 1226 aaKnown RBP22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 TAS2R38P59533 333 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 LAYNQ6UX15 382 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 PCDH20Q8N6Y1 951 aaKnown RBP22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 DEFB124Q8NES8 71 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 CCDC114Q96M63 670 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 KLC2Q9H0B6 622 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 IL21RQ9HBE5 538 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 PCSK1NQ9UHG2 260 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 FARP1Q9Y4F1 1045 aaPredicted RBP22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 SCINQ9Y6U3 715 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 WASF2Q9Y6W5 498 aa22.77■■□□□ 1.24
GTF2F1-204ENST00000594965 KDELR3O43731 214 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 DESP17661 470 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 MIPP30301 263 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 HNRNPH3P31942 346 aaKnown RBP22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 GRIA4P48058 902 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 NFKBIBQ15653 356 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 CARD16Q5EG05 197 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 KCNT1Q5JUK3 1230 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 ERMARDQ5T6L9 678 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 PIP5KL1Q5T9C9 394 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 RNF214Q8ND24 703 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 VOPP1Q96AW1 172 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 SLC6A18Q96N87 628 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 SNRNP25Q9BV90 132 aaKnown RBP22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 KDM4CQ9H3R0 1056 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 CATSPERBQ9H7T0 1116 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 IL36AQ9UHA7 158 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 NENFQ9UMX5 172 aa22.76■■□□□ 1.23
GTF2F1-204ENST00000594965 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.76■■□□□ 1.236e-7■■■■□ 24.6
GTF2F1-204ENST00000594965 TBC1D3DA0A087WVF3 549 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3IA0A087WXS9 549 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3EA0A087X179 549 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3KA0A087X1G2 549 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3FA6NER0 549 aaPredicted RBP22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3LB9A6J9 549 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 WNT9AO14904 365 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 LRCH4O75427 683 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3HP0C7X1 549 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 CEACAM1P13688 526 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 KIF19Q2TAC6 998 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 HLA-BQ31612 363 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 ARSIQ5FYB1 569 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3GQ6DHY5 549 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3CQ6IPX1 549 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 LEKR1Q6ZMV7 388 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 TBC1D3Q8IZP1 549 aaPredicted RBP22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 UMODL1-AS1Q8N2C9 162 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 ISG20Q96AZ6 181 aaKnown RBP22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 KCTD15Q96SI1 283 aaPredicted RBP22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 THAP2Q9H0W7 228 aa22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 DHX35Q9H5Z1 703 aaKnown RBP22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 MRPL47Q9HD33 250 aaKnown RBP22.75■■□□□ 1.23
GTF2F1-204ENST00000594965 RASA4BC9J798 803 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 KPNA3O00505 521 aaPredicted RBP22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 RASA4O43374 803 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 LATO43561 262 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 LEFTY1O75610 366 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 RNF8O76064 485 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 PRNPP04156 253 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 WNT1P04628 370 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 TPM3P06753 285 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 HTR7P34969 479 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 RECQLP46063 649 aaPredicted RBP22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 CCNHP51946 323 aaPredicted RBP22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 YBEYP58557 167 aaPredicted RBP22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 TPI1P60174 286 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 RACK1P63244 317 aaKnown RBP22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 VPS36Q86VN1 386 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 GRIN3AQ8TCU5 1115 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 HMCESQ96FZ2 354 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 HEPHQ9BQS7 1158 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 GAREM1Q9H706 876 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 HPCAL4Q9UM19 191 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 ANKRD6Q9Y2G4 727 aa22.74■■□□□ 1.23
GTF2F1-204ENST00000594965 SNX11Q9Y5W9 270 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms