RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ZNF143P52747 638 aaPredicted RBP14.97□□□□□ -0.01
FANCA-220ENST00000566409 SCAPQ12770 1279 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 NR1I3Q14994 352 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 RWDD4Q6NW29 188 aaKnown RBP14.97□□□□□ -0.01
FANCA-220ENST00000566409 DNAJC24Q6P3W2 148 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 C22orf39Q6P5X5 142 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 DPY19L3Q6ZPD9 716 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 TMIEQ8NEW7 156 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 BAHD1Q8TBE0 780 aaPredicted RBP14.97□□□□□ -0.01
FANCA-220ENST00000566409 MCEEQ96PE7 176 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 TMEM121BQ9BXQ6 578 aaPredicted RBP14.97□□□□□ -0.01
FANCA-220ENST00000566409 NOL6Q9H6R4 1146 aaKnown RBP14.97□□□□□ -0.01
FANCA-220ENST00000566409 TMEM248Q9NWD8 314 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 DNAI1Q9UI46 699 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 BTBD3Q9Y2F9 522 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 PCDHGB2Q9Y5G2 931 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 WASF2Q9Y6W5 498 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 PLXNB3Q9ULL4 1909 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 FREM2Q5SZK8 3169 aa14.97□□□□□ -0.01
FANCA-220ENST00000566409 ANKRD11Q6UB99 2663 aaPredicted RBP14.97□□□□□ -0.01
FANCA-220ENST00000566409 CFAP47Q6ZTR5 3102 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 A0A1W2PQC6 194 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 SYCE3A1L190 88 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 TMCO5BA8MYB1 307 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 C1QTNF3-AMACRE9PGA6 284 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 TNFAIP3P21580 790 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 CD38P28907 300 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 MAT2AP31153 395 aaKnown RBP14.96□□□□□ -0.01
FANCA-220ENST00000566409 SERPINH1P50454 418 aaKnown RBP14.96□□□□□ -0.01
FANCA-220ENST00000566409 HNRNPDQ14103 355 aaKnown RBP14.96□□□□□ -0.01
FANCA-220ENST00000566409 SHBQ15464 509 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 ARSIQ5FYB1 569 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 ZNF571Q7Z3V5 609 aaPredicted RBP14.96□□□□□ -0.01
FANCA-220ENST00000566409 SLFN11Q7Z7L1 901 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 SLCO6A1Q86UG4 719 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 SETD7Q8WTS6 366 aaKnown RBP14.96□□□□□ -0.01
FANCA-220ENST00000566409 ARHGEF2Q92974 986 aaKnown RBP14.96□□□□□ -0.01
FANCA-220ENST00000566409 SERAC1Q96JX3 654 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 CNPY3Q9BT09 278 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 KDM4CQ9H3R0 1056 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 HAUS4Q9H6D7 363 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 CBX8Q9HC52 389 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 AIPL1Q9NZN9 384 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 FCF1Q9Y324 198 aaKnown RBP14.96□□□□□ -0.01
FANCA-220ENST00000566409 ZFHX4Q86UP3 3567 aa14.96□□□□□ -0.01
FANCA-220ENST00000566409 DSPP15924 2871 aaKnown RBP14.95□□□□□ -0.02
FANCA-220ENST00000566409 LAMA5O15230 3695 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 GOLGA4Q13439 2230 aaKnown RBP14.95□□□□□ -0.02
FANCA-220ENST00000566409 C1QTNF9BB2RNN3 333 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 KPNA3O00505 521 aaPredicted RBP14.95□□□□□ -0.02
FANCA-220ENST00000566409 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
FANCA-220ENST00000566409 LEFTY1O75610 366 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 CCDC172P0C7W6 258 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 C1QTNF9P0C862 333 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 L1CAMP32004 1257 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 MAPKAPK2P49137 400 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 IL9RQ01113 521 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 SLC20A2Q08357 652 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 KLHL40Q2TBA0 621 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 RETSATQ6NUM9 610 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 SCYL2Q6P3W7 929 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 LEKR1Q6ZMV7 388 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 ADAT2Q7Z6V5 191 aaKnown RBP14.95□□□□□ -0.02
FANCA-220ENST00000566409 GLRX5Q86SX6 157 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 TRIM69Q86WT6 500 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 CHCHD4Q8N4Q1 142 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 ARFGAP1Q8N6T3 406 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 PNPLA1Q8N8W4 532 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 GRIN3AQ8TCU5 1115 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 TBC1D31Q96DN5 1066 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 VCPIP1Q96JH7 1222 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 TRIM7Q9C029 511 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 CEP44Q9C0F1 390 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 RETREG1Q9H6L5 497 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 AASDHPPTQ9NRN7 309 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 TOR4AQ9NXH8 423 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 KLK13Q9UKR3 277 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 FZD10Q9ULW2 581 aa14.95□□□□□ -0.02
FANCA-220ENST00000566409 TDRD6O60522 2096 aaKnown RBP14.94□□□□□ -0.02
FANCA-220ENST00000566409 A0A1B0GTQ1 180 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 DDX3XO00571 662 aaKnown RBP eCLIP14.94□□□□□ -0.02
FANCA-220ENST00000566409 PCDHGA12O60330 932 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 PRNPP04156 253 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 FTH1P19P0C7X4 201 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 PRKCIP41743 596 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 C21orf59P57076 290 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 ASIC2Q16515 512 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 FILIP1LQ4L180 1135 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 CARD16Q5EG05 197 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 NAPEPLDQ6IQ20 393 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 PLEKHA7Q6IQ23 1121 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 RAB44Q7Z6P3 723 aaPredicted RBP14.94□□□□□ -0.02
FANCA-220ENST00000566409 LUZP1Q86V48 1076 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 SPATS2Q86XZ4 545 aaKnown RBP14.94□□□□□ -0.02
FANCA-220ENST00000566409 PCDH20Q8N6Y1 951 aaKnown RBP14.94□□□□□ -0.02
FANCA-220ENST00000566409 RHBDD1Q8TEB9 315 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 GATA6Q92908 595 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 HDAC8Q9BY41 377 aa14.94□□□□□ -0.02
FANCA-220ENST00000566409 KLC2Q9H0B6 622 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms