RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 DYRK4Q9NR20 520 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 TAS2R14Q9NYV8 317 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 ANKRD6Q9Y2G4 727 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 PCDHGB2Q9Y5G2 931 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 A0A1B0GVT2 93 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 TMEM191CA6NGB0 347 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 ZSCAN5CA6NGD5 496 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 K7ERQ8 282 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 VILLO15195 856 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 FGF10O15520 208 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 SMAD6O43541 496 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 LATO43561 262 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 PLRG1O43660 514 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 RNF8O76064 485 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 EPHB2P29323 1055 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 PMLP29590 882 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 YBEYP58557 167 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 ARF5P84085 180 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 ZBED6P86452 979 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 SHC2P98077 582 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 CNTN1Q12860 1018 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 POLD3Q15054 466 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 SLC45A4Q5BKX6 768 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 C22orf39Q6P5X5 142 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 LINGO4Q6UY18 593 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 PRPF39Q86UA1 669 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 CASKIN2Q8WXE0 1202 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 ARHGEF2Q92974 986 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 LRIG1Q96JA1 1093 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 ISCUQ9H1K1 167 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 PREBQ9HCU5 417 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 TM7SF3Q9NS93 570 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 IL36AQ9UHA7 158 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 DNAI1Q9UI46 699 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 ANGPTL2Q9UKU9 493 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 FZD10Q9ULW2 581 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 CAPN11Q9UMQ6 739 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 DMTF1Q9Y222 760 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 LUC7L2Q9Y383 392 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 PCDHB9Q9Y5E1 797 aa13.43□□□□□ -0.26
HNRNPC-205ENST00000553300 WASH4PA8MWX3 477 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 KPNA3O00505 521 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 DDX3XO00571 662 aaKnown RBP eCLIP13.42□□□□□ -0.261e-57■■□□□ 12.4
HNRNPC-205ENST00000553300 KDELR3O43731 214 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 MAGEC1O60732 1142 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 GLDCP23378 1020 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 PSMA2P25787 234 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 CD38P28907 300 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 ZNF135P52742 658 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 C21orf59P57076 290 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 ZNF252P-AS1Q0IIN9 211 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 ACAP1Q15027 740 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 KIF19Q2TAC6 998 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 TDRD12Q587J7 1177 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 CARD16Q5EG05 197 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 AGBL4Q5VU57 503 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 E4F1Q66K89 784 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 DPY19L3Q6ZPD9 716 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 TRIM69Q86WT6 500 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 PSTKQ8IV42 348 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 RTL3Q8N8U3 475 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 OR2I1PQ8NGU4 316 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 HEPHQ9BQS7 1158 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 HDAC8Q9BY41 377 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 NDFIP2Q9NV92 336 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 CNOT8Q9UFF9 292 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 NEU3Q9UQ49 428 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.42□□□□□ -0.268e-13■■■□□ 16.8
HNRNPC-205ENST00000553300 CHD8Q9HCK8 2581 aa13.42□□□□□ -0.26
HNRNPC-205ENST00000553300 CEP295Q9C0D2 2601 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 GIPC1O14908 333 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 CREB3O43889 395 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 RNGTTO60942 597 aaKnown RBP13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 ZNF821O75541 412 aaPredicted RBP13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 TRIM16O95361 564 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 SERPING1P05155 500 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 CTSLP07711 333 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 SKILP12757 684 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 ACVRL1P37023 503 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 DNA2P51530 1060 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 SNRPD1P62314 119 aaKnown RBP13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 BNC1Q01954 994 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 OGDHQ02218 1023 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 OVGP1Q12889 678 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 PARP15Q460N3 678 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 SETMARQ53H47 684 aaPredicted RBP13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 INO80DQ53TQ3 878 aaPredicted RBP13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 ARSIQ5FYB1 569 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 ERMARDQ5T6L9 678 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 HGSNATQ68CP4 663 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 DBX2Q6ZNG2 339 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 UMODL1-AS1Q8N2C9 162 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 PYROXD2Q8N2H3 581 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 ZNF653Q96CK0 615 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 SERAC1Q96JX3 654 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 MAGEB5Q9BZ81 275 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 IFNKQ9P0W0 207 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 SNX11Q9Y5W9 270 aa13.41□□□□□ -0.26
HNRNPC-205ENST00000553300 FLRT2O43155 660 aa13.4□□□□□ -0.26
HNRNPC-205ENST00000553300 SH3BP5O60239 455 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms