RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 AASSQ9UDR5 926 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 CNPY2Q9Y2B0 182 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 UBE2J1Q9Y385 318 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 RNF114Q9Y508 228 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ATG2AQ2TAZ0 1938 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 MAST3O60307 1309 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 DOPEY2Q9Y3R5 2298 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ACACAQ13085 2346 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZNF236Q9UL36 1845 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 FBN3Q75N90 2809 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 TICRRQ7Z2Z1 1910 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SHROOM3Q8TF72 1996 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 TISP43B9A030 160 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 PSMD9O00233 223 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 TRIM24O15164 1050 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 NOBOXO60393 691 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SUN1O94901 812 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 TSPAN15O95858 294 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 CHRM3P20309 590 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 MMP8P22894 467 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 HOXA7P31268 230 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 PRKAR2BP31323 418 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 PGM1P36871 562 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 NPTX2P47972 431 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SEC24CP53992 1094 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 NR1H2P55055 460 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 ARF3P61204 181 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 DCAF7P61962 342 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 WDR5P61964 334 aaKnown RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 DEFB103AP81534 67 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 ARF1P84077 181 aaKnown RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 POU5F1Q01860 360 aaKnown RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SRSF1Q07955 248 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SF3A3Q12874 501 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 TUBB3Q13509 450 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 CBFBQ13951 182 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 GRM4Q14833 912 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 P3H1Q32P28 736 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZIK1Q3SY52 487 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM133BQ5BKY9 247 aaKnown RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 APOBEC3HQ6NTF7 200 aaKnown RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 HTR3DQ70Z44 454 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 TMPRSS9Q7Z410 1059 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 TMTC2Q8N394 836 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZNF808Q8N4W9 903 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 MB21D1Q8N884 522 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SMRP1Q8NCR6 262 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SUN3Q8TAQ9 357 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SH3KBP1Q96B97 665 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 RSPRY1Q96DX4 576 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 RRP36Q96EU6 259 aaKnown RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 REXO5Q96IC2 774 aaKnown RBP5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 VPS50Q96JG6 964 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 CCDC68Q9H2F9 335 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 FBXO28Q9NVF7 368 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 SH3BP1Q9Y3L3 701 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 PTPRQQ9UMZ3 2332 aa5.11□□□□□ -1.59
HMGB1P23-201ENST00000518743 FREM2Q5SZK8 3169 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 A0A1B0GTL3 188 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 GAGE12BA1L429 117 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 FSD2A1L4K1 749 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 GAGE12HA6NDE8 117 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 PGPEP1LA6NFU8 196 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 MBD3L5A6NJ08 208 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 PRSS47A8MTI9 375 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 H3BNC9 293 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 LAMA5O15230 3695 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 DHHO43323 396 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 RPP40O75818 363 aaKnown RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 WDR47O94967 919 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 PRSS23O95084 383 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 GJB5O95377 273 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 SCGB1D1O95968 90 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 PCCAP05165 728 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 HNRNPA1P09651 372 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 ATP1A3P13637 1013 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 FGFR4P22455 802 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 RFC2P35250 354 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 MSX2P35548 267 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 GPD2P43304 727 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 PCP4P48539 62 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 TUBP50607 506 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 SETQ01105 290 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 GOLGA8FQ08AF8 430 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 RRP1BQ14684 758 aaKnown RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 ACOX1Q15067 660 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 WDR45BQ5MNZ6 344 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 RBM20Q5T481 1227 aaKnown RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 SP5Q6BEB4 398 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 ABRAQ8N0Z2 381 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 C1orf131Q8NDD1 294 aaKnown RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZCCHC10Q8TBK6 192 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 CSGALNACT1Q8TDX6 532 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 ADAMTS18Q8TE60 1221 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZUFSPQ96AP4 578 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM136AQ96C01 138 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 BOD1Q96IK1 185 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 LRIG1Q96JA1 1093 aa5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM84BQ96KN1 310 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P23-201ENST00000518743 PIGSQ96S52 555 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms