RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 NTAN1Q96AB6 310 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 SUSD2Q9UGT4 822 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 PCSK1NQ9UHG2 260 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 ADAMTS1Q9UHI8 967 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 FZD10Q9ULW2 581 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 SCML1Q9UN30 329 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 HS3ST2Q9Y278 367 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 PPP2R2CQ9Y2T4 447 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-221ENST00000477561 EPN1Q9Y6I3 576 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-221ENST00000477561 ADAMTS9Q9P2N4 1935 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3DA0A087WVF3 549 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3IA0A087WXS9 549 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3EA0A087X179 549 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3KA0A087X1G2 549 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 A0A1B0GVT2 93 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3FA6NER0 549 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TMEM191CA6NGB0 347 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 LRRC72A6NJI9 287 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 EIF3CLB5ME19 914 aaKnown RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3LB9A6J9 549 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 KIF2AO00139 706 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 KPNA3O00505 521 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 KCNK3O14649 394 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 MCF2LO15068 1137 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 RAMP2O60895 175 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ZMPSTE24O75844 475 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 KCNK5O95279 499 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 IGHV4-34P06331 123 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 CTSLP07711 333 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 SYPP08247 313 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3HP0C7X1 549 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 EPHB2P29323 1055 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 L1CAMP32004 1257 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 CHRNA3P32297 505 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 DRD3P35462 400 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 EIF4A3P38919 411 aaKnown RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 MAPKAPK2P49137 400 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ZNF252P-AS1Q0IIN9 211 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 SCAPQ12770 1279 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 CNTN1Q12860 1018 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 SFSWAPQ12872 951 aaKnown RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 GRIK2Q13002 908 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 CA9Q16790 459 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ARSIQ5FYB1 569 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 FAM46CQ5VWP2 391 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 KIAA0895LQ68EN5 471 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3GQ6DHY5 549 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3CQ6IPX1 549 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 PSAPL1Q6NUJ1 521 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 RETSATQ6NUM9 610 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 C22orf39Q6P5X5 142 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 DSG4Q86SJ6 1040 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TBC1D3Q8IZP1 549 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ARFGAP1Q8N6T3 406 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 DEFB124Q8NES8 71 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 OR2A12Q8NGT7 310 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 OR2T34Q8NGX1 318 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 C1orf216Q8TAB5 229 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 PIP4K2CQ8TBX8 421 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 GRIN3AQ8TCU5 1115 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ARHGEF2Q92974 986 aaKnown RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 EIF3CQ99613 913 aaKnown RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 CHP1Q99653 195 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ACE2Q9BYF1 805 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ISCUQ9H1K1 167 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 DHX35Q9H5Z1 703 aaKnown RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 EBF2Q9HAK2 575 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TM9SF3Q9HD45 589 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TMEM248Q9NWD8 314 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 TRMT1Q9NXH9 659 aaKnown RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ARHGAP20Q9P2F6 1191 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 FZD4Q9ULV1 537 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 NEU3Q9UQ49 428 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
HDAC6-221ENST00000477561 ADGRG1Q9Y653 693 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 NUMA1Q14980 2115 aa8.45□□□□□ -1.06
HDAC6-221ENST00000477561 A0A087X0T9 212 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 C1QTNF3-AMACRE9PGA6 284 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 OPHN1O60890 802 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 ZNF821O75541 412 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 CD160O95971 181 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 FAM228BP0C875 321 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 DESP17661 470 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 CD27P26842 260 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 MIPP30301 263 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 MAT2AP31153 395 aaKnown RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 GKP32189 559 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 RECQLP46063 649 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 SERPINH1P50454 418 aaKnown RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 NOVA1P51513 510 aaKnown RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 CLCN6P51797 869 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 ADPRHP54922 357 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 PPP2CBP62714 309 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 PPP2CAP67775 309 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 FOXK2Q01167 660 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 BNC1Q01954 994 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 POLD3Q15054 466 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 KIF19Q2TAC6 998 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms