RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CPNE1Q99829 537 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 SACM1LQ9NTJ5 587 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 DTLQ9NZJ0 730 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 FAM32AQ9Y421 112 aaKnown RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 INHBBP09529 407 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 NFKBIAP25963 317 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 CCND2P30279 289 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 SDC4P31431 198 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 SPRP35270 261 aaPredicted RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 CD151P48509 253 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 NSUN2Q08J23 767 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS52-212ENST00000445902 GRTP1Q5TC63 336 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 MAP1SQ66K74 1059 aaPredicted RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 ABHD15Q6UXT9 468 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 VSIG10LQ86VR7 867 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 TMEM176AQ96HP8 235 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 DRC3Q9H069 523 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 IL1RL2Q9HB29 575 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 SUCOQ9UBS9 1254 aaKnown RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 CDH7Q9ULB5 785 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 LY75O60449 1722 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 RNF103-CHMP3A0A140T963 221 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 RNF103O00237 685 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 PLA2G6O60733 806 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 OXSR1O95747 527 aaPredicted RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 CXCL8P10145 99 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 ARL2P36404 184 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 LIMK2P53671 638 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 ZNF460Q14592 562 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 RGS21Q2M5E4 152 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 AGKQ53H12 422 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 KCTD8Q6ZWB6 473 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 RPS27LQ71UM5 84 aaKnown RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 SIX6OS1Q8N1H7 587 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 CCNYQ8ND76 341 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 RDM1Q8NG50 284 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 MFSD3Q96ES6 412 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 ANKRD36BP1Q96IX9 119 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 QKIQ96PU8 341 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS52-212ENST00000445902 APOL2Q9BQE5 337 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 ADI1Q9BV57 179 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 GTSE1Q9NYZ3 720 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 MORF4L1Q9UBU8 362 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 IPO11Q9UI26 975 aaKnown RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 A0A0A0MRY4 1105 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 CFAP99D6REC4 459 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 H0YJX3 145 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 DLGAP1O14490 977 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 ITGB3P05106 788 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 GOT1P17174 413 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 MAP4P27816 1152 aaKnown RBP14.15□□□□□ -0.14
VPS52-212ENST00000445902 SLC7A1P30825 629 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 AP3M2P53677 418 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SPIDRQ14159 915 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 PLCL1Q15111 1095 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 C6orf183Q5T699 404 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 LIPMQ5VYY2 423 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 CYS1Q717R9 158 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 LSMEM2Q8N112 164 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 CNTD1Q8N815 330 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 OR9I1Q8NGQ6 314 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 CHPT1Q8WUD6 406 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 KCTD4Q8WVF5 259 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 CASP10Q92851 521 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SPATA13Q96N96 652 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 MTG1Q9BT17 334 aaPredicted RBP14.15□□□□□ -0.14
VPS52-212ENST00000445902 TSPAN16Q9UKR8 245 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SBK3P0C264 359 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 HNRNPLP14866 589 aaKnown RBP eCLIP14.15□□□□□ -0.14
VPS52-212ENST00000445902 NR4A1P22736 598 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SP2Q02086 613 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 PRKAA1Q13131 559 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 RFTN1Q14699 578 aaPredicted RBP14.15□□□□□ -0.14
VPS52-212ENST00000445902 PPP1R3AQ16821 1122 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 C6orf10Q5SRN2 563 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 REP15Q6BDI9 236 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 STYK1Q6J9G0 422 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 NIPAL1Q6NVV3 410 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SLC2A7Q6PXP3 512 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 BTLAQ7Z6A9 289 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SNX29P2Q8IUI4 249 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 EPHX4Q8IUS5 362 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 PBXIP1Q96AQ6 731 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 RPL10LQ96L21 214 aaKnown RBP14.15□□□□□ -0.14
VPS52-212ENST00000445902 ZNF670Q9BS34 389 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SLC38A10Q9HBR0 1119 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 GID8Q9NWU2 228 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SIX4Q9UIU6 781 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 SNX9Q9Y5X1 595 aa14.15□□□□□ -0.14
VPS52-212ENST00000445902 OGTO15294 1046 aa14.14□□□□□ -0.15
VPS52-212ENST00000445902 NFICP08651 508 aa14.14□□□□□ -0.15
VPS52-212ENST00000445902 ATP6V1B2P21281 511 aa14.14□□□□□ -0.15
VPS52-212ENST00000445902 PERM1Q5SV97 790 aa14.14□□□□□ -0.15
VPS52-212ENST00000445902 TMEM214Q6NUQ4 689 aaKnown RBP14.14□□□□□ -0.15
VPS52-212ENST00000445902 CLEC14AQ86T13 490 aa14.14□□□□□ -0.15
VPS52-212ENST00000445902 TP53INP2Q8IXH6 220 aa14.14□□□□□ -0.15
VPS52-212ENST00000445902 HMGCLL1Q8TB92 370 aa14.14□□□□□ -0.15
VPS52-212ENST00000445902 ACDQ96AP0 544 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms