RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 OXNAD1Q96HP4 312 aaPredicted RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 LGMNQ99538 433 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 IRF2BPLQ9H1B7 796 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 TCF7L2Q9NQB0 619 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 TMCO1Q9UM00 188 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CLEC4AQ9UMR7 237 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 SERPINA1P01009 418 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 ADSSP30520 456 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 SLC1A6P48664 564 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 COL9A2Q14055 689 aaPredicted RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 C4orf46Q504U0 113 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 ZNF655Q8N720 491 aaPredicted RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 CCDC167Q9P0B6 97 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 PTGFRNQ9P2B2 879 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 C2orf71A6NGG8 1288 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 OR1E1P30953 314 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 FBXO36Q8NEA4 188 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 ITFG1Q8TB96 612 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 CDH9Q9ULB4 789 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 GPATCH8Q9UKJ3 1502 aaKnown RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 ERI2A8K979 691 aaKnown RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 RB1P06400 928 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 DHPSP49366 369 aaPredicted RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 ALG11Q2TAA5 492 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.24□□□□□ -0.61
MSH6-201ENST00000234420 NAXEQ8NCW5 288 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 TFB1MQ8WVM0 346 aaKnown RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 REXO2Q9Y3B8 237 aaKnown RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 NAB2Q15742 525 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 ATP13A4Q4VNC1 1196 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 NEK6Q9HC98 313 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 ABCB9Q9NP78 766 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 MAT2BQ9NZL9 334 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 A0A096LPK6 155 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 C19orf81C9J6K1 198 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 MTSS1O43312 755 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 PABPC1P11940 636 aaKnown RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 ANXA11P50995 505 aaKnown RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 FASTKQ14296 549 aaKnown RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 BICRALQ6AI39 1079 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 PRR5LQ6MZQ0 368 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 C11orf63Q6NUN7 778 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 SERPINA13PQ6UXR4 307 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 DNAJC14Q6Y2X3 702 aaPredicted RBP11.24□□□□□ -0.61
MSH6-201ENST00000234420 ERO1BQ86YB8 467 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 TC2NQ8N9U0 490 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 TRPV3Q8NET8 790 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 C1QTNF1Q9BXJ1 281 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 USP6P35125 1406 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 H0Y858 1186 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 RBP3P10745 1247 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 ITPKBP27987 946 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 PTGER2P43116 358 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 MASP1P48740 699 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 RPTNQ6XPR3 784 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 EMC1Q8N766 993 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 KBTBD8Q8NFY9 601 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 UGT2B28Q9BY64 529 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 RPS6KL1Q9Y6S9 549 aa11.24□□□□□ -0.61
MSH6-201ENST00000234420 OR7A10O76100 309 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 OMPP47874 163 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 FMR1Q06787 632 aaKnown RBP eCLIP11.23□□□□□ -0.619e-7■■■■□ 21.8
MSH6-201ENST00000234420 RIN1Q13671 783 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 NBPF12Q5TAG4 269 aaPredicted RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 MED28Q9H204 178 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.23□□□□□ -0.61
MSH6-201ENST00000234420 SLC27A5Q9Y2P5 690 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 ALG6Q9Y672 507 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 A0A1B0GTH6 734 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 KCNH1O95259 989 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 ALDH3A2P51648 485 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 EHD4Q9H223 541 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 MYH9P35579 1960 aaKnown RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 DCXO43602 365 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 SIN3BO75182 1162 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 CLK3P49761 638 aaKnown RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 TAF6P49848 677 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 SLC20A2Q08357 652 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 PIGHQ14442 188 aaPredicted RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 CDC42EP5Q6NZY7 148 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 CBWD2Q8IUF1 395 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 FIBCD1Q8N539 461 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 ZNF366Q8N895 744 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 TBC1D16Q8TBP0 767 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 MTMR12Q9C0I1 747 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 KCNN2Q9H2S1 579 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 OSER1Q9NX31 292 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 GNPTGQ9UJJ9 305 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 MGAT4AQ9UM21 535 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 CCDC154A6NI56 674 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 H7C1W4 665 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 FOLH1Q04609 750 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 GPAT3Q53EU6 434 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms