RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 MAGEA6P43360 314 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 ALDH1A3P47895 512 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 TUBP50607 506 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 SEMA3BQ13214 749 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 LRRC32Q14392 662 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 STAT4Q14765 748 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 SOWAHCQ53LP3 525 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-234ENST00000642041 NUGGCQ68CJ6 796 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 LRRC31Q6UY01 552 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 GPRIN1Q7Z2K8 1008 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 ANKS1BQ7Z6G8 1248 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 CCNJLQ8IV13 435 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 GSPT2Q8IYD1 628 aaKnown RBP17.63■□□□□ 0.41
PHGDH-234ENST00000642041 CCDC185Q8N715 623 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 MCUQ8NE86 351 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 FBXO32Q969P5 355 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 EXOC4Q96A65 974 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 TKTL2Q9H0I9 626 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 ZFP14Q9HCL3 533 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 ARHGEF4Q9NR80 690 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 GOLGA6AQ9NYA3 693 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 OR12D3Q9UGF7 316 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 FETUBQ9UGM5 382 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 TRHDEQ9UKU6 1024 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 PLAAQ9Y263 795 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 HBS1LQ9Y450 684 aaKnown RBP17.63■□□□□ 0.41
PHGDH-234ENST00000642041 COL4A2P08572 1712 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 IGSF10Q6WRI0 2623 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 FREM2Q5SZK8 3169 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 ERI2A8K979 691 aaKnown RBP17.62■□□□□ 0.41
PHGDH-234ENST00000642041 ABLIM3O94929 683 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 ZIC2O95409 532 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-234ENST00000642041 RHOP08100 348 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 PFKLP17858 780 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 CACNA2D1P54289 1103 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 MLLT6P55198 1093 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-234ENST00000642041 NR1H3Q13133 447 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 SLC5A9Q2M3M2 681 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 RNASEH2BQ5TBB1 312 aaKnown RBP17.62■□□□□ 0.41
PHGDH-234ENST00000642041 EMC10Q5UCC4 262 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 ITIH5Q86UX2 942 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 AZIN2Q96A70 460 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 PGM2Q96G03 612 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 PGLYRP2Q96PD5 576 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 QKIQ96PU8 341 aaKnown RBP eCLIP17.62■□□□□ 0.41
PHGDH-234ENST00000642041 DDX50Q9BQ39 737 aaKnown RBP17.62■□□□□ 0.41
PHGDH-234ENST00000642041 VPS45Q9NRW7 570 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 PSD3Q9NYI0 1048 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 HEY1Q9Y5J3 304 aa17.62■□□□□ 0.41
PHGDH-234ENST00000642041 TICRRQ7Z2Z1 1910 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 WASH4PA8MWX3 477 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 ALOX15BO15296 676 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 KCNN4O15554 427 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 ADAM12O43184 909 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 GOT1P17174 413 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 CEBPBP17676 345 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 MMRN1Q13201 1228 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 DPYSQ14117 519 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 RASA2Q15283 850 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 LLGL1Q15334 1064 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 TRADDQ15628 312 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 TRIP4Q15650 581 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-234ENST00000642041 TAF12Q16514 161 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 NCBP2-AS2Q69YL0 99 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 TIGD7Q6NT04 549 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-234ENST00000642041 C1orf228Q6PIY5 440 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 RNF19BQ6ZMZ0 732 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 TAC4Q86UU9 113 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 FAM76AQ8TAV0 307 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 GAB3Q8WWW8 586 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 HTR3CQ8WXA8 447 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 TRMT2BQ96GJ1 504 aaKnown RBP17.61■□□□□ 0.41
PHGDH-234ENST00000642041 MSANTD3Q96H12 275 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 BTN2A3PQ96KV6 586 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 MYRFLQ96LU7 910 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 SERPINB12Q96P63 405 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 OLFM3Q96PB7 478 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 SEPT5Q99719 369 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-234ENST00000642041 NEUROG2Q9H2A3 272 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 SMOC1Q9H4F8 434 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 USP29Q9HBJ7 922 aa17.61■□□□□ 0.41
PHGDH-234ENST00000642041 PPARGC1AQ9UBK2 798 aaKnown RBP17.61■□□□□ 0.41
PHGDH-234ENST00000642041 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-234ENST00000642041 A0A087WUV0 522 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 DCLK1O15075 740 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 RIPK2O43353 540 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 CREB3O43889 395 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 RNF40O75150 1001 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 SYF2O95926 243 aaKnown RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 ZDHHC11BP0C7U3 371 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 MLNP12872 115 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 PSMC3P17980 439 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 TPSB2P20231 275 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 GDI1P31150 447 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 HOXC13P31276 330 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 RPL22P35268 128 aaKnown RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 MPLP40238 635 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 TPSAB1Q15661 275 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 HIF1AQ16665 826 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 CA9Q16790 459 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms