RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 RAP1GAP2Q684P5 730 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 TRIM65Q6PJ69 517 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 KANSL1Q7Z3B3 1105 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 OR8D1Q8WZ84 308 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 HSFY1Q96LI6 401 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 ST7Q9NRC1 585 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 TRMT1Q9NXH9 659 aaKnown RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 CYTH4Q9UIA0 394 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 NAALADL1Q9UQQ1 740 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 PCDHB4Q9Y5E5 795 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 PCDHB1Q9Y5F3 818 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 MAST4O15021 2626 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 C1QTNF3-AMACRE9PGA6 284 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 F5H5T6 163 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 PRAMEF26H0Y7S4 382 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 SLC16A3O15427 465 aaKnown RBP8.05□□□□□ -1.12
CLK1-215ENST00000621181 SART1O43290 800 aaKnown RBP8.05□□□□□ -1.12
CLK1-215ENST00000621181 BNIP3LO60238 219 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 TUBB4AP04350 444 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 PDGFRAP16234 1089 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 DGKAP23743 735 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 BRD2P25440 801 aaKnown RBP8.05□□□□□ -1.12
CLK1-215ENST00000621181 TPM4P67936 248 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 GABREP78334 506 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 RHDQ02161 417 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 SLC12A1Q13621 1099 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 CNGA2Q16280 664 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 ISM2Q6H9L7 571 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 PCSK4Q6UW60 755 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 TAC4Q86UU9 113 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 TRIM69Q86WT6 500 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 CIR1Q86X95 450 aaPredicted RBP8.05□□□□□ -1.12
CLK1-215ENST00000621181 REXO1L1PQ8IX06 675 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 LSMEM2Q8N112 164 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 PPM1KQ8N3J5 372 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 OR4C6Q8NH72 309 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 KLHDC7BQ96G42 594 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 SLC39A13Q96H72 371 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 CCDC34Q96HJ3 373 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 BTN2A3PQ96KV6 586 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 ZNF578Q96N58 590 aaPredicted RBP8.05□□□□□ -1.12
CLK1-215ENST00000621181 DEPDC7Q96QD5 511 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 TSG101Q99816 390 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 MYOCQ99972 504 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 TRIM62Q9BVG3 475 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 ABCG4Q9H172 646 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 CPNE5Q9HCH3 593 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 FANCLQ9NW38 375 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 SARDHQ9UL12 918 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 CA5BQ9Y2D0 317 aa8.05□□□□□ -1.12
CLK1-215ENST00000621181 BOD1L1Q8NFC6 3051 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 NAV2Q8IVL1 2488 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 SLC31A1O15431 190 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 KLK10O43240 276 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 CBFA2T2O43439 604 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 USP12O75317 370 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 FYNP06241 537 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 THEGLP0DJG4 465 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 ALPPL2P10696 532 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 TACR2P21452 398 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 UBASH3AP57075 661 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 FKBP3Q00688 224 aaKnown RBP8.04□□□□□ -1.12
CLK1-215ENST00000621181 CNTN1Q12860 1018 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 ZC3H12AQ5D1E8 599 aaKnown RBP8.04□□□□□ -1.12
CLK1-215ENST00000621181 AGBL4Q5VU57 503 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 SYPL2Q5VXT5 272 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 APTXQ7Z2E3 356 aaKnown RBP8.04□□□□□ -1.12
CLK1-215ENST00000621181 SLC25A45Q8N413 288 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 KIF18AQ8NI77 898 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 ENOX1Q8TC92 643 aaKnown RBP8.04□□□□□ -1.12
CLK1-215ENST00000621181 FRS2Q8WU20 508 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 KCNE4Q8WWG9 221 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 RNF34Q969K3 372 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 HIC2Q96JB3 615 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 NT5C1BQ96P26 610 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 ZSWIM1Q9BR11 485 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 CALN1Q9BXU9 219 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 PREBQ9HCU5 417 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 UCKL1Q9NWZ5 548 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 ARMCX3Q9UH62 379 aaPredicted RBP8.04□□□□□ -1.12
CLK1-215ENST00000621181 SLC12A6Q9UHW9 1150 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 SLC25A13Q9UJS0 675 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 COL12A1Q99715 3063 aa8.04□□□□□ -1.12
CLK1-215ENST00000621181 A0A1B0GVM2 712 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 TCAF2A6NFQ2 919 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 NEMP2A6NFY4 417 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 OPA1O60313 960 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 CALCAP01258 141 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 CKMT1AP12532 417 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 PRLRP16471 622 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 PRCPP42785 496 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 ACADSBP45954 432 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 OXCT1P55809 520 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 ERVPABLB-1P60509 514 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 KCNMA1Q12791 1236 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 CETN1Q12798 172 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 RABGAP1LQ5R372 815 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 TTC39BQ5VTQ0 682 aaPredicted RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 Q6ZVU0 165 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 UBR7Q8N806 425 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms