RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 RETSATQ6NUM9 610 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 RWDD4Q6NW29 188 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 DRC7Q8IY82 874 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 ATP11CQ8NB49 1132 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 OR2A12Q8NGT7 310 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 ARHGEF2Q92974 986 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 OMDQ99983 421 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 ORAI3Q9BRQ5 295 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 XPO4Q9C0E2 1151 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 CEP44Q9C0F1 390 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 MAGEH1Q9H213 219 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 KDM4CQ9H3R0 1056 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 ATP13A1Q9HD20 1204 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 DNAAF2Q9NVR5 837 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 SARDHQ9UL12 918 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 TPX2Q9ULW0 747 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 SCINQ9Y6U3 715 aa17.59■□□□□ 0.41
SFSWAP-205ENST00000537164 WASH4PA8MWX3 477 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 EIF3CLB5ME19 914 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 K7ERQ8 282 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 SLC7A4O43246 635 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 ATMINO43313 823 aaPredicted RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 ZNF821O75541 412 aaPredicted RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 GJB3O75712 270 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 RNASEH2AO75792 299 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 CD160O95971 181 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 TPM3P06753 285 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 CD27P26842 260 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 SERPINH1P50454 418 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 ARF5P84085 180 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 PPM1JQ5JR12 505 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 KIAA0895LQ68EN5 471 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 SCYL2Q6P3W7 929 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 DNAAF5Q86Y56 855 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 PYROXD2Q8N2H3 581 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 HDDC3Q8N4P3 179 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 ZCCHC9Q8N567 271 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 ARFGAP1Q8N6T3 406 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 RTL3Q8N8U3 475 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 TMIEQ8NEW7 156 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 OR2T34Q8NGX1 318 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 CCDC114Q96M63 670 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 EIF3CQ99613 913 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 CNOT8Q9UFF9 292 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.58■□□□□ 0.43e-7■■■□□ 15.1
SFSWAP-205ENST00000537164 KNL1Q8NG31 2342 aa17.58■□□□□ 0.4
SFSWAP-205ENST00000537164 PCNX2A6NKB5 2137 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 LRRC72A6NJI9 287 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 C1QTNF3-AMACRE9PGA6 284 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 CBX4O00257 560 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 CSRP1P21291 193 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 PSMA2P25787 234 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 CCR5P51681 352 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 ADPRHP54922 357 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 ACAP1Q15027 740 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 TDRD12Q587J7 1177 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 C22orf39Q6P5X5 142 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 NCEH1Q6PIU2 408 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 LINGO4Q6UY18 593 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 VPS36Q86VN1 386 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 PLPP6Q8IY26 295 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 MINDY1Q8N5J2 469 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 PIP4K2CQ8TBX8 421 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 GANCQ8TET4 914 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 ISG20Q96AZ6 181 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 ZNF653Q96CK0 615 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 EPAS1Q99814 870 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 NCAPGQ9BPX3 1015 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 SPON2Q9BUD6 331 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 MIR1-1HGQ9H1L0 117 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 NOL6Q9H6R4 1146 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 MRPL47Q9HD33 250 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 FSCN3Q9NQT6 498 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 DNAI1Q9UI46 699 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 FARP1Q9Y4F1 1045 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 SLCO1B1Q9Y6L6 691 aa17.57■□□□□ 0.4
SFSWAP-205ENST00000537164 A0A1W2PPC4 97 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 RAMP2O60895 175 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 KCNK5O95279 499 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 CTSLP07711 333 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 EPHB2P29323 1055 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 CASP14P31944 242 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 CHRNA3P32297 505 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 ACVRL1P37023 503 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 MAPK8P45983 427 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 AFF3P51826 1226 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 METAP1P53582 386 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 ATXN3P54252 364 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 GEMIN4P57678 1058 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 YBEYP58557 167 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 BNC1Q01954 994 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 GRIK2Q13002 908 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 SLC14A1Q13336 389 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 CYP4V2Q6ZWL3 525 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 PSTKQ8IV42 348 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 UMODL1-AS1Q8N2C9 162 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 PCDH20Q8N6Y1 951 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 CPLX3Q8WVH0 158 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 TRIM7Q9C029 511 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms