RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GSTM5P46439 218 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 KCNC1P48547 511 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 TOB1P50616 345 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZNF134P52741 427 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 CASP6P55212 293 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 RRP1P56182 461 aaKnown RBP5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 EIF4A1P60842 406 aaKnown RBP5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 TIAL1Q01085 375 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 NUCB1Q02818 461 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 HYAL1Q12794 435 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 BAK1Q16611 211 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 COL28A1Q2UY09 1125 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 SPDYE7PQ495Y7 208 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 ANO7Q6IWH7 933 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 ACAD10Q6JQN1 1059 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 POLNQ7Z5Q5 900 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 KCTD20Q7Z5Y7 419 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZNF280BQ86YH2 543 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 D2HGDHQ8N465 521 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 FSTL5Q8N475 847 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 FSIP1Q8NA03 581 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 HMGB4Q8WW32 186 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 ATRIPQ8WXE1 791 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 ST8SIA4Q92187 359 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 SNX19Q92543 992 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 RILPL2Q969X0 211 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 LRRC37BQ96QE4 947 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 WDR24Q96S15 920 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 RAD9AQ99638 391 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 REEP2Q9BRK0 252 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 TRPV6Q9H1D0 765 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 CLMPQ9H6B4 373 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 CXorf36Q9H7Y0 433 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 CHODLQ9H9P2 273 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 ORC3Q9UBD5 711 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 NKX1-2Q9UD57 310 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 VPS51Q9UID3 782 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 TBC1D30Q9Y2I9 924 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 POLQO75417 2590 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 AKAP13Q12802 2813 aa5.13□□□□□ -1.59
HMGB1P23-201ENST00000518743 TET1Q8NFU7 2136 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 WDFY3Q8IZQ1 3526 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 KALRNO60229 2985 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 NLRC5Q86WI3 1866 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM90A18PA6NE21 464 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM90A16PA6NEW6 464 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM90A9PA6NNJ1 464 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM90A5PA8MXJ8 464 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 F5H697 171 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 hCG_1984214I3L0E3 225 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 LAMTOR5O43504 91 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZNF500O60304 480 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 PPP6R2O75170 966 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 RTN3O95197 1032 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM90A15PP0C7V4 464 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM90A14PP0C7W9 464 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 SP9P0CG40 484 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZSCAN22P10073 491 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 PSMA4P25789 261 aaKnown RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 UQCRC1P31930 480 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 CCR5P51681 352 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 SLURP1P55000 103 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 CTSWP56202 376 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 LINC00310P59036 64 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 NHLH2Q02577 135 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 MESP2Q0VG99 397 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 TBL3Q12788 808 aaKnown RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 DYRK1AQ13627 763 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 BOP1Q14137 746 aaKnown RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 GPR68Q15743 365 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 BTBD16Q32M84 506 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 EPC2Q52LR7 807 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 SPECC1Q5M775 1068 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAM102AQ5T9C2 384 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 TEDDM1Q5T9Z0 273 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ARHGAP40Q5TG30 622 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 CCDC30Q5VVM6 783 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 RGS7BPQ6MZT1 257 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 RRAGAQ7L523 313 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 RASGRP2Q7LDG7 609 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 TAX1BP1Q86VP1 789 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 RPAP2Q8IXW5 612 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ELOA2Q8IYF1 753 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 LRRC71Q8N4P6 559 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ANKRD44Q8N8A2 993 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ZMIZ2Q8NF64 920 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 OR56A1Q8NGH5 318 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 OR1N1Q8NGS0 311 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 OSCP1Q8WVF1 389 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ERP27Q96DN0 273 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 TMEM176AQ96HP8 235 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 FAR2Q96K12 515 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 OR14A2Q96R54 314 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 PAAF1Q9BRP4 392 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 VN1R3Q9BXE9 311 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 PAIP1Q9H074 479 aaKnown RBP5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 SMOC2Q9H3U7 446 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 ABHD16BQ9H3Z7 469 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 KCNK12Q9HB15 430 aa5.12□□□□□ -1.59
HMGB1P23-201ENST00000518743 CTTNBP2NLQ9P2B4 639 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms