RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CDKN2BP42772 138 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 CTSOP43234 321 aaPredicted RBP15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 CLCN6P51797 869 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 GEMIN4P57678 1058 aaKnown RBP15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 COPS2P61201 443 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 ST8SIA6P61647 398 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 SERINC3Q13530 473 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 PAFAH1B3Q15102 231 aaKnown RBP15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 CRY1Q16526 586 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 PPP2R5EQ16537 467 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 ODF2Q5BJF6 829 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 TFDP3Q5H9I0 405 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 NCBP2-AS2Q69YL0 99 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 SLC9A4Q6AI14 798 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 IL31Q6EBC2 164 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 SDE2Q6IQ49 451 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 RETSATQ6NUM9 610 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 RCOR2Q8IZ40 523 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 PQLC3Q8N755 202 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 UBL4BQ8N7F7 174 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 HMCESQ96FZ2 354 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 ACOX2Q99424 681 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 EPC1Q9H2F5 836 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 CD248Q9HCU0 757 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 PARD6AQ9NPB6 346 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 ETNK2Q9NVF9 386 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 CACNA2D2Q9NY47 1150 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 SLC25A13Q9UJS0 675 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 CHD6Q8TD26 2715 aa15.27■□□□□ 0.03
CDC42SE1-203ENST00000470278 A0A1W2PQF6 199 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 ARHGAP42A6NI28 874 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 CBX4O00257 560 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 KDELR3O43731 214 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 ATP9BO43861 1147 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 SNAP91O60641 907 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 C7P10643 843 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 TNNT1P13805 278 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 HOXB2P14652 356 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 PRKCHP24723 683 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 HOXA6P31267 233 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 CXCL12P48061 93 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 SERPINH1P50454 418 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 DGKEP52429 567 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 RWDD2BP57060 319 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 ARF5P84085 180 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 CSTF1Q05048 431 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 SLC20A2Q08357 652 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 FNDC3BQ53EP0 1204 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZC3H14Q6PJT7 736 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 MFSD7Q6UXD7 560 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 SERPINA13PQ6UXR4 307 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 SPOCD1Q6ZMY3 1216 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 METTL3Q86U44 580 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 SH2D3CQ8N5H7 860 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 ALG3Q92685 438 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 SPON2Q9BUD6 331 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 CEP44Q9C0F1 390 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZDHHC4Q9NPG8 344 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 KCND1Q9NSA2 647 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 PYCARDQ9ULZ3 195 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 HPCAL4Q9UM19 191 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 EFR3BQ9Y2G0 817 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 PCDHGA2Q9Y5H1 932 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 FRYQ5TBA9 3013 aa15.26■□□□□ 0.03
CDC42SE1-203ENST00000470278 hCG_1818297A0A087WSY0 165 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 DDX3YO15523 660 aaKnown RBP15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 LAMTOR5O43504 91 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 MFSD11O43934 449 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZFXP17010 805 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 GLDCP23378 1020 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 NNMTP40261 264 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 STK19P49842 368 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 SATB1Q01826 763 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 HNRNPA1L2Q32P51 320 aaKnown RBP15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 MEI1Q5TIA1 1274 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 LRRC49Q8IUZ0 686 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 CCDC33Q8N5R6 958 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 CAMKK1Q8N5S9 505 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 PLD5Q8N7P1 536 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 FRS2Q8WU20 508 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 CASKIN2Q8WXE0 1202 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 RNF25Q96BH1 459 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 CELF6Q96J87 481 aaKnown RBP15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 SLC39A8Q9C0K1 460 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 FBRSQ9HAH7 460 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 PDFQ9HBH1 243 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 C2orf42Q9NWW7 574 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 SMG5Q9UPR3 1016 aaKnown RBP15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 MFHAS1Q9Y4C4 1052 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 RAD54BQ9Y620 910 aa15.25■□□□□ 0.03
CDC42SE1-203ENST00000470278 NUP205Q92621 2012 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 K7ESF4 209 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 APOL1O14791 398 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 PRAMEF11O60813 436 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 CD160O95971 181 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 SRCP12931 536 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 PAPOLAP51003 745 aaKnown RBP15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 GALNT2Q10471 571 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms