RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 ENDOUP21128 410 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 PRKCHP24723 683 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 CRHR1P34998 444 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 NUDT2P50583 147 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 SLC25A11Q02978 314 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 CCDC153Q494R4 210 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 NBPF12Q5TAG4 269 aaPredicted RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 RWDD4Q6NW29 188 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 SH3BP5LQ7L8J4 393 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 PODNQ7Z5L7 613 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 PLD6Q8N2A8 252 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 TMEM35BQ8NCS4 154 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 NDRG1Q92597 394 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 ZUFSPQ96AP4 578 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 MASTLQ96GX5 879 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 CPB2Q96IY4 423 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 RTKNQ9BST9 563 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 LTB4R2Q9NPC1 389 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 MKS1Q9NXB0 559 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 UTP6Q9NYH9 597 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 ZNF70Q9UC06 446 aaPredicted RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 BCAP29Q9UHQ4 241 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 NUDT5Q9UKK9 219 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 RIPK3Q9Y572 518 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 ARHGEF37A1IGU5 675 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 ZBBXA8MT70 800 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 hCG_1984214I3L0E3 225 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 TNFRSF10AO00220 468 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 ASNSP08243 561 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 HMOX2P30519 316 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 CD68P34810 354 aaPredicted RBP8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 SREBF1P36956 1147 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 FLOT2Q14254 428 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 SPCS2Q15005 226 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 MOGQ16653 247 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 ZNF667Q5HYK9 610 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 C6orf10Q5SRN2 563 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 TTC39BQ5VTQ0 682 aaPredicted RBP8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 XAF1Q6GPH4 301 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 B3GNT9Q6UX72 402 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 CHSY3Q70JA7 882 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 SLC26A11Q86WA9 606 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 SNX32Q86XE0 403 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 PQLC3Q8N755 202 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 GFM2Q969S9 779 aaKnown RBP8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 LRGUKQ96M69 825 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 HOXD1Q9GZZ0 328 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 PNPLA8Q9NP80 782 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 DNAJC28Q9NX36 388 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 COL20A1Q9P218 1284 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 ERVK-11Q9UQG0 969 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 TCAF1Q9Y4C2 921 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 PCDHGA11Q9Y5H2 935 aa8.9□□□□□ -0.99
SMARCA1-203ENST00000371123 WDR81Q562E7 1941 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 SCAMP3O14828 347 aaKnown RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 CXCR3P49682 368 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 PERM1Q5SV97 790 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 UNC5AQ6ZN44 842 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 CYP4V2Q6ZWL3 525 aaPredicted RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 DDHD1Q8NEL9 900 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TMEM174Q8WUU8 243 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TMA16Q96EY4 203 aaKnown RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 NPAS2Q99743 824 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 LPIN3Q9BQK8 851 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 NOL11Q9H8H0 719 aaKnown RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 PPCSQ9HAB8 311 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 PARVAQ9NVD7 372 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TMEM216Q9P0N5 145 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 FAM8A1Q9UBU6 413 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 SLCO3A1Q9UIG8 710 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 MYRFQ9Y2G1 1151 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 IQANK1A0A1B0GTG1 560 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TCAF2A6NFQ2 919 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 PFDN6O15212 129 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 MSI1O43347 362 aaKnown RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 VNN1O95497 513 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 PIK3R1P27986 724 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TUBA4AP68366 448 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 NSUN2Q08J23 767 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 CCDC58Q4VC31 144 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 ZBTB8OSQ8IWT0 167 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 ACVR1CQ8NER5 493 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 COPS5Q92905 334 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 FKBP10Q96AY3 582 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 RMND5BQ96G75 393 aaPredicted RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 SLC38A10Q9HBR0 1119 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 JPH1Q9HDC5 661 aaPredicted RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 ZC3H7BQ9UGR2 993 aaKnown RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 GNPTGQ9UJJ9 305 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 CNOT11Q9UKZ1 510 aaKnown RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TIMM13Q9Y5L4 95 aaPredicted RBP8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 SLC15A5A6NIM6 579 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TMEM114B3SHH9 223 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 KCNK1O00180 336 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 CHRNGP07510 517 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 CHRNB1P11230 501 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 SPNP16150 400 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TAZQ16635 292 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 TFDP3Q5H9I0 405 aa8.89□□□□□ -0.99
SMARCA1-203ENST00000371123 RARS2Q5T160 578 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms