RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, human

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf54-208	ENST00000530279	PRDM12	Q9H4Q4	367 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	SYNPO2L	Q9H987	977 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	AGO3	Q9H9G7	860 aa	Known RBP	4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	ATP6V0A4	Q9HBG4	840 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	UBN1	Q9NPG3	1134 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	RGS18	Q9NS28	235 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	PNPO	Q9NVS9	261 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	TMEM161A	Q9NX61	479 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	SIDT1	Q9NXL6	827 aa	Known RBP	4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	LRWD1	Q9UFC0	647 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	DNAI1	Q9UI46	699 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	ST3GAL5	Q9UNP4	418 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	PCDHA13	Q9Y5I0	950 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	SNX13	Q9Y5W8	968 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	SZT2	Q5T011	3432 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279		A0A0C4DFX4	3053 aa		4.23	□□□□□ -1.73
C11orf54-208	ENST00000530279	MICAL3	Q7RTP6	2002 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	CNTNAP2	Q9UHC6	1331 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	BDP1	A6H8Y1	2624 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	RASA4B	C9J798	803 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	INPPL1	O15357	1258 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	RASA4	O43374	803 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	STX6	O43752	255 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	C1R	P00736	705 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	GAA	P10253	952 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	GHR	P10912	638 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	MYF5	P13349	255 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	HOXB6	P17509	224 aa	Known RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	ADSL	P30566	484 aa	Predicted RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	ADCY8	P40145	1251 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	UBA7	P41226	1012 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	PPM1F	P49593	454 aa	Predicted RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	KCNQ1	P51787	676 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	POU5F1	Q01860	360 aa	Known RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	CREM	Q03060	361 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	TAP1	Q03518	808 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	CD69	Q07108	199 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	LAMTOR4	Q0VGL1	99 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	IL10RA	Q13651	578 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	NFYC	Q13952	458 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	GALE	Q14376	348 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	EMC2	Q15006	297 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	UGCG	Q16739	394 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	XKR9	Q5GH70	373 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	DGKK	Q5KSL6	1271 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	NCAPH2	Q6IBW4	605 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	RD3	Q7Z3Z2	195 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	MRPL10	Q7Z7H8	261 aa	Known RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	CATSPER3	Q86XQ3	398 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	HACE1	Q8IYU2	909 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	MYOCD	Q8IZQ8	938 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	PQLC1	Q8N2U9	271 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	PLA2G15	Q8NCC3	412 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	TRAPPC12	Q8WVT3	735 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	NKD2	Q969F2	451 aa	Predicted RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	SLC35A4	Q96G79	324 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	CCDC43	Q96MW1	224 aa	Known RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	SCLT1	Q96NL6	688 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	TSPAN18	Q96SJ8	248 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	CDX2	Q99626	313 aa	Predicted RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	PYM1	Q9BRP8	204 aa	Known RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	SOX7	Q9BT81	388 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	EIF2A	Q9BY44	585 aa	Known RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	MRPL9	Q9BYD2	267 aa	Known RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	CCSER1	Q9C0I3	900 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	TMEM117	Q9H0C3	514 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	TTYH1	Q9H313	450 aa	Predicted RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	NELFA	Q9H3P2	528 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	SERHL	Q9NQF3	203 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	DMRT3	Q9NQL9	472 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	RGL1	Q9NZL6	768 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	LZTS1	Q9Y250	596 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	ATP6V1D	Q9Y5K8	247 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	EVPL	Q92817	2033 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	CHD9	Q3L8U1	2897 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	TANC1	Q9C0D5	1861 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	TRANK1	O15050	2925 aa		4.22	□□□□□ -1.73
C11orf54-208	ENST00000530279	DENND3	A2RUS2	1198 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	ARHGEF35	A5YM69	484 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279		F5H423	210 aa	Predicted RBP	4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279		H3BNC9	293 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	ARHGAP6	O43182	974 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	PPP6R2	O75170	966 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	TMEM127	O75204	238 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	ALDH1A2	O94788	518 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	YEATS4	O95619	227 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	CA3	P07451	260 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	HSP90AA1	P07900	732 aa	Known RBP	4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	MYB	P10242	640 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	TYR	P14679	529 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	CD52	P31358	61 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	PPM1A	P35813	382 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	BMPR1A	P36894	532 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	CCT6A	P40227	531 aa	Known RBP	4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	TEC	P42680	631 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	NAMPT	P43490	491 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	KIR2DL3	P43628	341 aa		4.21	□□□□□ -1.74
C11orf54-208	ENST00000530279	CCT5	P48643	541 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms