RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 KDM5CP41229 1560 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 C9IYK1 514 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 GTPBP1O00178 669 aaKnown RBP11.27□□□□□ -0.6
MSH6-201ENST00000234420 GARTP22102 1010 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 COILP38432 576 aaPredicted RBP11.27□□□□□ -0.6
MSH6-201ENST00000234420 CCNG1P51959 295 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 GJA9P57773 515 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 AFTPHQ6ULP2 937 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 MCEMP1Q8IX19 187 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 CDRT15Q96T59 188 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 C1QTNF7Q9BXJ2 289 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 EPB41L4BQ9H329 900 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 CAB39LQ9H9S4 337 aa11.27□□□□□ -0.6
MSH6-201ENST00000234420 CDC42BPGQ6DT37 1551 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 PSMD9O00233 223 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 PRODHO43272 600 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 GLRA3O75311 464 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 SOAT2O75908 522 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 CNPP09543 421 aaKnown RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 IFNAR1P17181 557 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 EMC2Q15006 297 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 ZFP1Q6P2D0 407 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 PHC2Q8IXK0 858 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 POF1BQ8WVV4 589 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 NT5C1AQ9BXI3 368 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 BRINP2Q9C0B6 783 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 PAK5Q9P286 719 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 APOC1P02654 83 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 CLCN3P51790 818 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 GRIK3Q13003 919 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 LDLRAP1Q5SW96 308 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 AGAP9Q5VTM2 703 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 BROXQ5VW32 411 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 FOXR2Q6PJQ5 311 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 ULK2Q8IYT8 1036 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 BHLHE22Q8NFJ8 381 aaPredicted RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 APOL2Q9BQE5 337 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 RIOK2Q9BVS4 552 aaKnown RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 OSBPL3Q9H4L5 887 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 LDAHQ9H6V9 325 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 SLC26A4O43511 780 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 RLN1P04808 185 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 COMTP21964 271 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 MAGEA12P43365 314 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 PKNOX1P55347 436 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 LRP8Q14114 963 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 SMCO1Q147U7 214 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 PSRC1Q6PGN9 363 aaPredicted RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 PPIL6Q8IXY8 311 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 ADGRF2Q8IZF7 708 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 RAD54LQ92698 747 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 OSBP2Q969R2 916 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 RERGQ96A58 199 aaPredicted RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 ALDH8A1Q9H2A2 487 aaPredicted RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 RNPEPL1Q9HAU8 725 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 MRPL17Q9NRX2 175 aaKnown RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 ARL3P36405 182 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 KCNA10Q16322 511 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 PHF19Q5T6S3 580 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 TEKT5Q96M29 485 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 SUCOQ9UBS9 1254 aaKnown RBP11.27□□□□□ -0.61
MSH6-201ENST00000234420 GGA2Q9UJY4 613 aa11.27□□□□□ -0.61
MSH6-201ENST00000234420 NT5C1B-RDH14C9J2C7 533 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 PSMD3O43242 534 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 GAS2O43903 313 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 PCCBP05166 539 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 NR1H2P55055 460 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 RAB25P57735 213 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 CBWD3Q5JTY5 395 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 CBWD5Q5RIA9 395 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 ELMO1Q92556 727 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 MYLPFQ96A32 169 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 WDR12Q9GZL7 423 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 CRISPLD1Q9H336 500 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 XKR8Q9H6D3 395 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 SNTG2Q9NY99 539 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 ANGPT4Q9Y264 503 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 FFAR2O15552 330 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 TTKP33981 857 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 IDH2P48735 452 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 ZMYM1Q5SVZ6 1142 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 CENPSQ8N2Z9 138 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 SSH3Q8TE77 659 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 FOXP3Q9BZS1 431 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 ANKARQ7Z5J8 1434 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 MDM4O15151 490 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 ANXA5P08758 320 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 RPL5P46777 297 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 SOX10P56693 466 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 USP46P62068 366 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 ANKRD26P1Q6NSI1 321 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 FAM129CQ86XR2 697 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 GFM1Q96RP9 751 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 PIH1D1Q9NWS0 290 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 FCHO1O14526 889 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 PROCP04070 461 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 STRIP1Q5VSL9 837 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms