RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 C2CD4CQ8TF44 421 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 SCFD2Q8WU76 684 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 PERPQ96FX8 193 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 CALML4Q96GE6 196 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 FEM1CQ96JP0 617 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 ADGRE3Q9BY15 652 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 ANKFY1Q9P2R3 1169 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 CORO1CQ9ULV4 474 aaPredicted RBP5.49□□□□□ -1.53
LINC00397-202ENST00000606785 PCDHGB4Q9UN71 923 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 SPATA31A1Q5TZJ5 1347 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 PASKQ96RG2 1323 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 TEX13CA0A0J9YWL9 993 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 LIPT2A6NK58 231 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 H0YIZ8 118 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 QSOX1O00391 747 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 PRYO14603 147 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 FYB1O15117 783 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 HBP1O60381 514 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 GJB3O75712 270 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 TUBB4AP04350 444 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 APEHP13798 732 aaKnown RBP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 HOXB9P17482 250 aaPredicted RBP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 NDUFB7P17568 137 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 GSTM2P28161 218 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 CPA2P48052 419 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 COPB1P53618 953 aaKnown RBP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 EEFSECP57772 596 aaKnown RBP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 R3HDM1Q15032 1099 aaKnown RBP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 SLC18A3Q16572 532 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 ZNF667Q5HYK9 610 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 TMEM63BQ5T3F8 832 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 KAZNQ674X7 775 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 SLC30A6Q6NXT4 461 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 CDC73Q6P1J9 531 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 TMEM81Q6P7N7 255 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 NCEH1Q6PIU2 408 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 CYP20A1Q6UW02 462 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 ANKRD23Q86SG2 305 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 TMEM200AQ86VY9 491 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 MAFAQ8NHW3 353 aaPredicted RBP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 ATP2A3Q93084 1043 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 LENG9Q96B70 501 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 ZNF845Q96IR2 970 aaPredicted RBP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 KLHL15Q96M94 604 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 GPR78Q96P69 363 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 MXD3Q9BW11 206 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 FTOQ9C0B1 505 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 ERVK-5Q9HDB9 667 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 GAR1Q9NY12 217 aaKnown RBP5.48□□□□□ -1.53
LINC00397-202ENST00000606785 IL1RAPL1Q9NZN1 696 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 EHD2Q9NZN4 543 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 SLCO3A1Q9UIG8 710 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 ST6GALNAC2Q9UJ37 374 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 RPS6KA6Q9UK32 745 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 PKP3Q9Y446 797 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 CLSPNQ9HAW4 1339 aa5.48□□□□□ -1.53
LINC00397-202ENST00000606785 C17orf100A8MU93 164 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 PLSCR1O15162 318 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 LDLRAD4O15165 306 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 DKC1O60832 514 aaKnown RBP eCLIP5.47□□□□□ -1.53
LINC00397-202ENST00000606785 CNTN5O94779 1100 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 PDE8BO95263 885 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 PGM3O95394 542 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 PEX11BO96011 259 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 CDH2P19022 906 aaPredicted RBP5.47□□□□□ -1.53
LINC00397-202ENST00000606785 ACSL1P33121 698 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 CPOXP36551 454 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 ADPRHP54922 357 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 SNX16P57768 344 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 BLOC1S1P78537 153 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 IFI35P80217 286 aaPredicted RBP5.47□□□□□ -1.53
LINC00397-202ENST00000606785 CALD1Q05682 793 aaKnown RBP5.47□□□□□ -1.53
LINC00397-202ENST00000606785 TMEM115Q12893 351 aaPredicted RBP5.47□□□□□ -1.53
LINC00397-202ENST00000606785 MFSD13AQ14CX5 517 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 MED22Q15528 200 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 ALDH1L2Q3SY69 923 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 GLE1Q53GS7 698 aaKnown RBP5.47□□□□□ -1.53
LINC00397-202ENST00000606785 ERICH6BQ5W0A0 696 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 ZKSCAN2Q63HK3 967 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 C17orf99Q6UX52 265 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 RHOUQ7L0Q8 258 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 RNF144BQ7Z419 303 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 ULK2Q8IYT8 1036 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 TAGAPQ8N103 731 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 WDTC1Q8N5D0 677 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 EXTL1Q92935 676 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 MMS19Q96T76 1030 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 TXLNGYQ9BZA5 131 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 PEMTQ9UBM1 199 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 NOL7Q9UMY1 257 aaKnown RBP5.47□□□□□ -1.53
LINC00397-202ENST00000606785 TESMINQ9Y4I5 508 aa5.47□□□□□ -1.53
LINC00397-202ENST00000606785 C17orf113A0A1B0GUU1 675 aa5.46□□□□□ -1.54
LINC00397-202ENST00000606785 MCIDASD6RGH6 385 aa5.46□□□□□ -1.54
LINC00397-202ENST00000606785 GCOM1H8Y6P7 765 aaPredicted RBP5.46□□□□□ -1.54
LINC00397-202ENST00000606785 TTLL1O95922 423 aa5.46□□□□□ -1.54
LINC00397-202ENST00000606785 EIF2S1P05198 315 aaKnown RBP5.46□□□□□ -1.54
LINC00397-202ENST00000606785 ADRB2P07550 413 aa5.46□□□□□ -1.54
LINC00397-202ENST00000606785 ADH4P08319 380 aa5.46□□□□□ -1.54
LINC00397-202ENST00000606785 C1SP09871 688 aa5.46□□□□□ -1.54
LINC00397-202ENST00000606785 RFPL3SP0C7P2 107 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms